Gene Pput_1964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1964 
Symbol 
ID5191950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2232320 
End bp2233372 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content64% 
IMG OID640586425 
Producthypothetical protein 
Protein accessionYP_001267291 
Protein GI148547189 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.44514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.164812 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTGG CGCTGTTGCA AGGCTGTGCC GGGCGCCGGG AAGAAGCGCC CGAAGCGGAC 
CCGACCAAAA TCCGTGCGCA GCTCCTGCGG CTGTTACCCG CCCAGGTCAA GGACCGCGAG
GGTTGGGCCA ACGATATCCA GGCAGCCTTC GAAGCCCAGC GCATAGCGCC CAGTAAAAGT
AATCTGTGCG CAGTGCTGGC GGTGACCGAA CAGGAGTCGA CCTTCACTGC GGACCCGCAG
GTGCCCAACC TTGGGCGTAT CGCCCGCCAG GAGATCGACC GCCGCGCTGC GCGTCTGCAT
ATTCCCAAAC TGCTGGTCGA CGGTGCGCTG AAGACGCCGT CGGGCAACGG CAAGAGCTAC
CAGCAGCGGT TGCAGACGGT GCGCAGCGAA AAGCAGTTGA GCGAACTGTA CGACGAAGTC
GTTGCTCGCG TGCCGCTGGG CAAGACCTTG CTGGGCGGGC TGAATCCGGT GCACACCGGC
GGGCCGATGC AAGTCAGCAT CGATTTTGCC GAAAAGCATG CGAGGGATTA CCCCTACAGC
CATGAAGGCA CGATTCGCCA GGAAGTGTTC AGCCGGCGCG GCGGCATGTA CTTCGGTATT
GCCCACCTGT TGGGCTACCC GGCCAACTAC GAGCGCCAGC TTTACCGTTT CGCCGATTTC
AACGCGGGCT GGTACGCCAG CCGCAATGCG GCATTCCAGG CGGCATTGAG CAAGGTCACG
GGGGTGAAGC TGGCACTGGA CGGCGACCTG GTGGCGCCAG GGGCGATCAT GCCGGGTACG
ACTGAACTGG CCGCGCGCAA GCTGGGGGTG AAGCTGGGGC TGCGTAACCC GCAGATCCGA
AGCCAGCTGG AGGAGGCCGA CAGCCTGGCG TTCGAGGACA GCAAGCTGTA CAGCGGGGTG
TTCGCCCTGG CGGATGCCAA AGCCGGCAAA CCGTTGCCCC GCGCAGTGTT ACCGGGCATC
GAGCTGAAGA GCCCGAAGAT TACCCGCAAG CTGACCACGG CCTGGTTTGC CGGGCGGGTC
GATGAGCGCT ATCAGCGGTG CATGAAGCGT TAG
 
Protein sequence
MALALLQGCA GRREEAPEAD PTKIRAQLLR LLPAQVKDRE GWANDIQAAF EAQRIAPSKS 
NLCAVLAVTE QESTFTADPQ VPNLGRIARQ EIDRRAARLH IPKLLVDGAL KTPSGNGKSY
QQRLQTVRSE KQLSELYDEV VARVPLGKTL LGGLNPVHTG GPMQVSIDFA EKHARDYPYS
HEGTIRQEVF SRRGGMYFGI AHLLGYPANY ERQLYRFADF NAGWYASRNA AFQAALSKVT
GVKLALDGDL VAPGAIMPGT TELAARKLGV KLGLRNPQIR SQLEEADSLA FEDSKLYSGV
FALADAKAGK PLPRAVLPGI ELKSPKITRK LTTAWFAGRV DERYQRCMKR