Gene Pput_1960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1960 
Symbol 
ID5191620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2230211 
End bp2230612 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content63% 
IMG OID640586421 
Producthypothetical protein 
Protein accessionYP_001267287 
Protein GI148547185 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0228739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.423904 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACGC CCGTTCCTTT ACGCCAACCT TGCCCCCCTG GCGCCTGCGT CTGCGGCCGC 
GAGCAATTGG CCGACCATCC GCAGGCCGCC CAGCGCATCC TCTTGCTGAC CCGGCAGGAA
GAAAAACGCC TGCTCGAACG CCTGGAAAAC CTGAGGGACC TGGAAGACCT TCAACGTCTG
CAGCAGCGCC TGTACGAAAA CCTCGGCATC CGCGTGCACA TCGCCCCCGG TTACAACGAG
GTACGGACCA TGCGCGGCAT CGTCATCGAG CTGGACGAGC AACCCGGGCT GTGTCGCAAG
ACCCGGCAGT CTATCCCGGC GGCAATCCGG CGCGGGCTGG AGCGTAATCC GCAGGTTGCG
TTCCGGTTGC TCGATACGCA TGACCTGTTG CGTGATACCT GA
 
Protein sequence
MSTPVPLRQP CPPGACVCGR EQLADHPQAA QRILLLTRQE EKRLLERLEN LRDLEDLQRL 
QQRLYENLGI RVHIAPGYNE VRTMRGIVIE LDEQPGLCRK TRQSIPAAIR RGLERNPQVA
FRLLDTHDLL RDT