| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1954 |
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| Symbol | |
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| ID | 5192927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2224166 |
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| End bp | 2225083 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640586415 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001267281 |
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| Protein GI | 148547179 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.336194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.870065 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTCG CCATCAACGC CCTGCAAAAC GCGCAAGGTG CCCCCACGGG CGCCGGCGCC
CCGGGCACCG CACCGCGCCG TGCCAGCCTG AGCCAGCGCT GGAAAGGCAG CCGCAACCTG
CTGCCAGCCC TGCTGTTCCT TGGCCTGTTC TTCTTCGCCC CGCTGGTCGG CCTGTTGCTG
CGCGGGGTGC TGGAGCCAAC GCCAGGGCTG GGTAACTACG AGCAGCTGTT CGCCAACTCG
GCCTATGCAC GGGTGCTGTT CAACACCTTC TCGGTGGCCG GCGTGGTTAC CCTGATCAGC
GTGCTGCTGG GCTTCCCGCT GGCCTGGGCA ATCACCCTGG TGCCCAAGGG GTGGGGCCGC
TGGCTGCTGA ACATCGTGCT GCTGTCGATG TGGACCAGTC TGCTGGCGCG CACCTACTCG
TGGCTGGTGC TGCTGCAGAG CTCGGGGGTG ATCAACAAGG CGTTGATGGC CATGGGCATC
ATCGATGCCC CGCTGGAAAT GGTGCACAAC CTCACCGGCG TGGTAATCGG CATGAGCTAC
ATCATGATCC CGTTCATCGT GCTGCCACTG CAGGCGACCA TGCACGCCAT CGACCCGATG
GTGCTGCAGG CCGGTTCGAT CTGTGGTGCC AGCCCGTGGA CCAACTTCTG GAAGGTGTTC
CTGCCGCTGT GCCGCTCGGG GCTGTTCTCC GGGGCGCTGA TGGTGTTCGT GATGTCGCTC
GGTTACTACG TCACCCCGGC GCTGCTGGGG GGCGCGCAGA ACATGATGCT GCCTGAATTC
ATCATCCAGC AGGTGCAGTC GTTCCTCAAC TGGGGCCTGG CCAGCGCCGC TGCCGCACTG
CTGGTGGCGA TCACCCTGGT GCTCTTCTAC CTGTACCTGA AGCTGCAGCC GGAATCCCCG
GTTGGCAACG CGAGGTAA
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| Protein sequence | MKVAINALQN AQGAPTGAGA PGTAPRRASL SQRWKGSRNL LPALLFLGLF FFAPLVGLLL
RGVLEPTPGL GNYEQLFANS AYARVLFNTF SVAGVVTLIS VLLGFPLAWA ITLVPKGWGR
WLLNIVLLSM WTSLLARTYS WLVLLQSSGV INKALMAMGI IDAPLEMVHN LTGVVIGMSY
IMIPFIVLPL QATMHAIDPM VLQAGSICGA SPWTNFWKVF LPLCRSGLFS GALMVFVMSL
GYYVTPALLG GAQNMMLPEF IIQQVQSFLN WGLASAAAAL LVAITLVLFY LYLKLQPESP
VGNAR
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