| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1952 |
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| Symbol | |
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| ID | 5192784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2222187 |
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| End bp | 2223335 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640586413 |
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| Product | ABC transporter related |
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| Protein accession | YP_001267279 |
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| Protein GI | 148547177 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.647045 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCAG TGATCAAAGA CAACGCGCAC GGCAAAACCC TGGTCAGCCT GCGCGGCCTG
AACAAGCACT ACGGCGACTT CACCGCCGTG GACAACCTCA ACCTGGAGAT CCAGGACGGC
GAGTTCCTGA CCTTCCTCGG TTCCAGCGGC TCGGGCAAGT CCACCACCCT GTCGATGCTG
GCCGGCTTCG AAACACCCAG CAGCGGCGAG ATCCTGGTCG ACGGCCAGTC GTTGGTCAAT
GTGCCGCCGC ACAAGCGCGA TATCGGCATG GTGTTCCAGC GCTATTCGCT GTTCCCGCAC
CTGAATGTGC GTGACAACAT CGCCTTCCCA CTGGCCATTC GCAAACTCGG CGCTGCCGAA
ACCGCCAAGC GCGTCGACGC CATGCTCAAG CTGGTGCAAC TGGAGCCGTT CGCGCACCGC
AAACCCTCGC AAATGTCGGG CGGCCAGCAG CAGCGCGTGG CGATTGCCCG GGCGCTCGTG
TACGAGCCAC GCATCCTGCT GATGGACGAG CCGCTCGGCG CGCTGGACAA GAAGCTGCGT
GAAGACCTGC AGGACGAACT GCGCCAGCTG CACCGCCGCC TGGGCATTAC CATTGTCTAC
GTGACCCACG ACCAGGAAGA GGCCATGCGC CTGTCGCAGC GCATCGCCAT CTTCAGCCAC
GGCAAGATCG TCGGCCTGGG CACCGGGTAC GACTTGTACC AGAATCCGCC GAATGCCTTT
GTTGCGTCGT TCCTGGGCAA CTCCAACTTC CTGCGGATCA AGGCCAGCAG CAATGGCGCA
GGCAGCTTCG AGGGCCAACC AGTGGCCATC CGCCTCACCC CAGGCCTGGC CGCCGAGCAG
GATGCGCTGA TCATGGTGCG TCCGGAAAAA GCCCTGGCCC TGACCGCCGA ACAAGCGGCG
CGCGAGCCAT TGCCGGCGGG CTGGAACGAG GTCAGTGCCA AGGTGGGCGA AGTGCTGTTC
CTGGGTGAAA GCCAGACCTG TCATGTGGTG ACTGCAGGGG GTACCGAGCT GACGGTGAAG
GCCCTGTCGG CCGCGGGCAT GCCGATGCAG CCGGGCGACA GCGTGAAGGT GCGTTGGGCA
GTGGCCGACG CTTGCATTTA TACCGAATGG GCCGAGAGCG ACCTGAGCAA GTCGGCCGGG
GCACATTAA
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| Protein sequence | MSAVIKDNAH GKTLVSLRGL NKHYGDFTAV DNLNLEIQDG EFLTFLGSSG SGKSTTLSML
AGFETPSSGE ILVDGQSLVN VPPHKRDIGM VFQRYSLFPH LNVRDNIAFP LAIRKLGAAE
TAKRVDAMLK LVQLEPFAHR KPSQMSGGQQ QRVAIARALV YEPRILLMDE PLGALDKKLR
EDLQDELRQL HRRLGITIVY VTHDQEEAMR LSQRIAIFSH GKIVGLGTGY DLYQNPPNAF
VASFLGNSNF LRIKASSNGA GSFEGQPVAI RLTPGLAAEQ DALIMVRPEK ALALTAEQAA
REPLPAGWNE VSAKVGEVLF LGESQTCHVV TAGGTELTVK ALSAAGMPMQ PGDSVKVRWA
VADACIYTEW AESDLSKSAG AH
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