Gene Pput_1949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1949 
Symbol 
ID5191419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2218297 
End bp2219136 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content57% 
IMG OID640586410 
ProductUTP-glucose-1-phosphate uridylyltransferase 
Protein accessionYP_001267276 
Protein GI148547174 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1210] UDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01099] UTP-glucose-1-phosphate uridylyltransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.376857 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.490446 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAA AATGCTTGTT CCCGGCAGCC GGCTACGGCA CACGCTTCTT GCCTGCTACC 
AAAGCCATGC CCAAGGAAAT GCTGCCGGTG GTCAACAAGC CACTGATCCA GTATGGCGTT
GAAGAAGCAT TGGATGCGGG TCTGAACGAG ATCTCCATCG TTACCGGGCG CGGCAAGCGC
GCCCTGGAAG ACCACTTCGA CATCAGCTAC GAGCTGGAAA ACCAGATCAA GGGCACCGAC
AAGGAAAAAT ACCTGGTCGG TATTCGTCGT CTGCTCAACG AGTGCTCGTT CTCGTACACG
CGCCAGACCG AAATGAAGGG CCTCGGCCAC GCCATTCTCA CTGGCCGCCC ACTGATCGGC
GACGAGCCGT TCGCGGTGGT GCTGGCGGAC GACCTGTGCG TCAACCCGGA AGGTGACGGC
GTGCTGACTC AGATGGTCAA GCTGTACAAA CAGTACCGCT GCTCGATCGT CGCCATCCAG
GAAGTCGACC CGCAGGAAAC CAACAAGTAT GGTGTGATCG CCGGTGAGAT GATCCGCGAC
GACATCTTCC GTGTGACCAA CATGGTCGAA AAACCGGCCC CGGAAGACGC GCCTTCGAAC
CTGGCGATCA TTGGCCGTTA CATCCTGACC CCGGATATCT TCGACATCAT CGCCAATACC
AAGCCAGGCA AAGGCGGTGA AATCCAGATC ACTGATGCCC TGTTGCAGCA GGCGAAGGAT
GGCTGCGTGA TTGCCTACAA GTTCAAGGGC AAGCGTTTCG ACTGCGGTGG CGCCGAAGGC
TACATCGACG CGACCAACTT CTGCTTCGAG AACTACTACA AGACTGGCAA GGCTTACTGA
 
Protein sequence
MIKKCLFPAA GYGTRFLPAT KAMPKEMLPV VNKPLIQYGV EEALDAGLNE ISIVTGRGKR 
ALEDHFDISY ELENQIKGTD KEKYLVGIRR LLNECSFSYT RQTEMKGLGH AILTGRPLIG
DEPFAVVLAD DLCVNPEGDG VLTQMVKLYK QYRCSIVAIQ EVDPQETNKY GVIAGEMIRD
DIFRVTNMVE KPAPEDAPSN LAIIGRYILT PDIFDIIANT KPGKGGEIQI TDALLQQAKD
GCVIAYKFKG KRFDCGGAEG YIDATNFCFE NYYKTGKAY