Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1947 |
Symbol | |
ID | 5191838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 2216499 |
End bp | 2217149 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640586408 |
Product | cytochrome c, class I |
Protein accession | YP_001267274 |
Protein GI | 148547172 |
COG category | [C] Energy production and conversion |
COG ID | [COG2863] Cytochrome c553 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.457627 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.677602 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACCGT TGAGACGCTT GATGATCGGC AGCTTGCTGA TCCTGGCCTG GCCCGCGGCA CATGCCGCTG ACGGTCAGAA GGTCTTCACC CAGGGTGGGG CCAACCCCGC CGCCATGGCC TGCCTGGGTT GCCACGGCCC GGACGGCAAG GGCATTGCGG CTGCCGGCTT TCCACGTTTG GCCGGGCTAC CGGCCGGTTA CCTTGCCAAG CAGTTGCAGG ACTGGCGCAA CGGCAGCCGC AAGCAGCCGG TGATGGAACC TTTGGCCAAG GCCCTGAGCG ACGACGAAAT CAAGGCCGTC AGTACTTACC TGGCCAGCCT GCCAGCAGCG CCCGCTGGCG ACCTGCACCG CCAGCAGATT GCCGATGACC CGACCACCCG CATGGCCCTG TACGGCGACT GGAGCCGGCA GATTCCAGGT TGCGTGCAAT GCCACGGGCC GGGTGGCGGC GGGGTGGGCG AACACTTCCC GCCCTTGGCC GGCCAGCCCG CCAGTTACCT GGTGGCACAG CTCAATGCCT GGCGCGACGG CAGCCGCAGC AATGACCCCA ACCAGCTGAT GGTCGGCGTG GCCAAGGCCA TGACCGATGA GGAGATCAAG GCTGTTGCCG AGTTCTTTGC CCGCCCCGTC CGCCAGGAGG TCACGCCATG A
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Protein sequence | MTPLRRLMIG SLLILAWPAA HAADGQKVFT QGGANPAAMA CLGCHGPDGK GIAAAGFPRL AGLPAGYLAK QLQDWRNGSR KQPVMEPLAK ALSDDEIKAV STYLASLPAA PAGDLHRQQI ADDPTTRMAL YGDWSRQIPG CVQCHGPGGG GVGEHFPPLA GQPASYLVAQ LNAWRDGSRS NDPNQLMVGV AKAMTDEEIK AVAEFFARPV RQEVTP
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