Gene Pput_1947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1947 
Symbol 
ID5191838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2216499 
End bp2217149 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content67% 
IMG OID640586408 
Productcytochrome c, class I 
Protein accessionYP_001267274 
Protein GI148547172 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.457627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.677602 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCGT TGAGACGCTT GATGATCGGC AGCTTGCTGA TCCTGGCCTG GCCCGCGGCA 
CATGCCGCTG ACGGTCAGAA GGTCTTCACC CAGGGTGGGG CCAACCCCGC CGCCATGGCC
TGCCTGGGTT GCCACGGCCC GGACGGCAAG GGCATTGCGG CTGCCGGCTT TCCACGTTTG
GCCGGGCTAC CGGCCGGTTA CCTTGCCAAG CAGTTGCAGG ACTGGCGCAA CGGCAGCCGC
AAGCAGCCGG TGATGGAACC TTTGGCCAAG GCCCTGAGCG ACGACGAAAT CAAGGCCGTC
AGTACTTACC TGGCCAGCCT GCCAGCAGCG CCCGCTGGCG ACCTGCACCG CCAGCAGATT
GCCGATGACC CGACCACCCG CATGGCCCTG TACGGCGACT GGAGCCGGCA GATTCCAGGT
TGCGTGCAAT GCCACGGGCC GGGTGGCGGC GGGGTGGGCG AACACTTCCC GCCCTTGGCC
GGCCAGCCCG CCAGTTACCT GGTGGCACAG CTCAATGCCT GGCGCGACGG CAGCCGCAGC
AATGACCCCA ACCAGCTGAT GGTCGGCGTG GCCAAGGCCA TGACCGATGA GGAGATCAAG
GCTGTTGCCG AGTTCTTTGC CCGCCCCGTC CGCCAGGAGG TCACGCCATG A
 
Protein sequence
MTPLRRLMIG SLLILAWPAA HAADGQKVFT QGGANPAAMA CLGCHGPDGK GIAAAGFPRL 
AGLPAGYLAK QLQDWRNGSR KQPVMEPLAK ALSDDEIKAV STYLASLPAA PAGDLHRQQI
ADDPTTRMAL YGDWSRQIPG CVQCHGPGGG GVGEHFPPLA GQPASYLVAQ LNAWRDGSRS
NDPNQLMVGV AKAMTDEEIK AVAEFFARPV RQEVTP