| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1939 |
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| Symbol | |
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| ID | 5195271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2210590 |
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| End bp | 2211612 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640586400 |
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| Product | DNA topoisomerase |
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| Protein accession | YP_001267266 |
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| Protein GI | 148547164 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3569] Topoisomerase IB |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.915147 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACT GCCCCCTGCC GCGCACCCTG CACTACGTTG ACGACAGTCA GCCGGGCCTG
ACCCGTCGGC GCTGGCGCGA CCGTTTCATC TACCTCGATG CCGATGGCCA ACGAGTACGC
GACAGCGAAA CCCTCGCACG CATCGCCGCA CTGGTGATCC CCCCGGCCTA CACGGATGTG
TGGATCTGCG CCGACCCGCA AGGCCACCTG CAAGCCACCG GCCGTGATGC CCGTGGCCGC
AAGCAGTACC GCTACCATGC GCAGTGGCGC GAACTGCGCG ACCAGCACAA ATACGGGCGC
ATGCTTGCGT TCGCCCAAGC CCTGCCAAAG CTGCGCACAC AGCTGGAAGC CCACTTGGCG
CGGCCAGGGC TGGACCGGGA AAAGGTCATG GCGCTGGTGG TGAGCCTGCT GGACCACACC
CTGATCCGCA TTGGCAACCA GCGCTACCTG CGCGATAACC GGTCGTACGG ATTGACCACC
CTGCGCAATC GCCATGTACA GATCAAAGGC AGCAGCATTC GCTTTCAATT CCGCGGCAAG
CGCGGCGTCG AACACAACGT CACCCTCAAC GACCGGCGCT TGGCTAACCT GCTCAAACGC
TGCATGGAAC TGCCTGGGCA GGCACTGTTT CAGTACCTGG ATGAAGACGG CCAGCGCCAT
AGTGTCGGCT CCACCGAGGT CAATCAGTTT TTGCAGCAGT TGACCGGCGC CGACTTCACT
GCCAAGGACT ATCGCACCTG GGCCGGCAGC AGCCTGGCAT TGAACCTGCT GAAGCCCTTG
GCCTGGGAGC CGGAGAGTGA AGCCAAACGT CAGGTCGCCG CAATAGTCCG CCAGGTAGCC
ACGCGCCTGG GCAATACGCC GGCCGTGTGC CGGCGCTGCT ACATCCACCC GGCAGTCCTG
GAGCACTATA CCTTGGGGCG CCTTGCCAAT TTACCGAAAA ACCGTGTGCG CAAAGGCCTG
GACCCGGAGG AAGTGGCCTT GCTGTTGTTT CTTCAGGCAC TCGAGGAACA GGAGGCCCAT
TGA
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| Protein sequence | MLDCPLPRTL HYVDDSQPGL TRRRWRDRFI YLDADGQRVR DSETLARIAA LVIPPAYTDV
WICADPQGHL QATGRDARGR KQYRYHAQWR ELRDQHKYGR MLAFAQALPK LRTQLEAHLA
RPGLDREKVM ALVVSLLDHT LIRIGNQRYL RDNRSYGLTT LRNRHVQIKG SSIRFQFRGK
RGVEHNVTLN DRRLANLLKR CMELPGQALF QYLDEDGQRH SVGSTEVNQF LQQLTGADFT
AKDYRTWAGS SLALNLLKPL AWEPESEAKR QVAAIVRQVA TRLGNTPAVC RRCYIHPAVL
EHYTLGRLAN LPKNRVRKGL DPEEVALLLF LQALEEQEAH
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