Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1934 |
Symbol | |
ID | 5192980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2206053 |
End bp | 2206520 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640586394 |
Product | DoxX family protein |
Protein accession | YP_001267261 |
Protein GI | 148547159 |
COG category | [S] Function unknown |
COG ID | [COG2259] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.467271 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTGGCG TAGCTGCTAA AGTGGAGCTT GTCCCCGTCC ACTGGAACGC CGCCATGCGC TACTCCCTGT TCGATGGTCA ACGCGACATC ATTATCCTGA TCGCCCGCGT ACTGCTGATG GTCCTCTTCG TCTTGTCTGG CTGGGCCAAG CTGACCGGCT TCGATGGCAC GGTAGGCTAC ATGACCTCGC TCGGCGCCCC TGCCCCGATG CTGGCAGCAG GGATTGCCGT CATCATGGAG TTCGTCGTCG CAATCCTGTT GATCCTCGGT TTCTACACGC GGCCGCTGGC CTTTCTATTC GCGCTGTTCG TACTGGGCAC GGCGCTGCTG GGCCACCCGT TCTGGAACAT GGTCGACCCC GAGCGCAGCG CCAACATGAC TCAGTTTCTG AAAAACCTCA GCATCATGGG CGGCCTGCTG TTGCTGGCGG TAAGCGGGCC CGGGCGGTTC TCGGTGGATG GTCGCTGA
|
Protein sequence | MSGVAAKVEL VPVHWNAAMR YSLFDGQRDI IILIARVLLM VLFVLSGWAK LTGFDGTVGY MTSLGAPAPM LAAGIAVIME FVVAILLILG FYTRPLAFLF ALFVLGTALL GHPFWNMVDP ERSANMTQFL KNLSIMGGLL LLAVSGPGRF SVDGR
|
| |