Gene Pput_1934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1934 
Symbol 
ID5192980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2206053 
End bp2206520 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content61% 
IMG OID640586394 
ProductDoxX family protein 
Protein accessionYP_001267261 
Protein GI148547159 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.467271 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGGCG TAGCTGCTAA AGTGGAGCTT GTCCCCGTCC ACTGGAACGC CGCCATGCGC 
TACTCCCTGT TCGATGGTCA ACGCGACATC ATTATCCTGA TCGCCCGCGT ACTGCTGATG
GTCCTCTTCG TCTTGTCTGG CTGGGCCAAG CTGACCGGCT TCGATGGCAC GGTAGGCTAC
ATGACCTCGC TCGGCGCCCC TGCCCCGATG CTGGCAGCAG GGATTGCCGT CATCATGGAG
TTCGTCGTCG CAATCCTGTT GATCCTCGGT TTCTACACGC GGCCGCTGGC CTTTCTATTC
GCGCTGTTCG TACTGGGCAC GGCGCTGCTG GGCCACCCGT TCTGGAACAT GGTCGACCCC
GAGCGCAGCG CCAACATGAC TCAGTTTCTG AAAAACCTCA GCATCATGGG CGGCCTGCTG
TTGCTGGCGG TAAGCGGGCC CGGGCGGTTC TCGGTGGATG GTCGCTGA
 
Protein sequence
MSGVAAKVEL VPVHWNAAMR YSLFDGQRDI IILIARVLLM VLFVLSGWAK LTGFDGTVGY 
MTSLGAPAPM LAAGIAVIME FVVAILLILG FYTRPLAFLF ALFVLGTALL GHPFWNMVDP
ERSANMTQFL KNLSIMGGLL LLAVSGPGRF SVDGR