Gene Pput_1917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1917 
Symbol 
ID5192401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2193244 
End bp2193720 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content52% 
IMG OID640586379 
Producthypothetical protein 
Protein accessionYP_001267246 
Protein GI148547144 
COG category[S] Function unknown 
COG ID[COG4420] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCCGT TAACCTCTGA TCAGTCGAAA CCTCATGAAA CTCCTGAAGA CGTCGACCAT 
CTCAGGTTTC ATCGCGCCCA TGAGCATATG CACCACCCCT TTGGTAATGA TGCATTTGCC
CGCAGACCCG AAGCTTTCGC CCGTTTCTTT GGCACACCTT TGTTCCTAGG GTCCCAGTCA
CTAGTGGTTC TTATTTGGAT GGGTATCAGC TTATCGGGGC TGTCAGCGTT CGATCCCTAC
CCCTTCATTC TACTGAATCT AGCGTTTAGT CTGCAGGCGG CCTACGCGGC CCCTCTAATT
CTTCTGGCAC AAACTCGCCA AGCCGACCGT GACAAAGCTA CCTCTGAAGC AGACGCACGA
CATCGAGAGG CAATTGCCAT GGCCAATCAA CGACGGCAGC GGGACGCAGA GATTCACAGC
CAGCAGCTAC TGCAGTTATT GGAGCAAAAT ACACACCTCA CGGAAGTAAC AAAGTAA
 
Protein sequence
MDPLTSDQSK PHETPEDVDH LRFHRAHEHM HHPFGNDAFA RRPEAFARFF GTPLFLGSQS 
LVVLIWMGIS LSGLSAFDPY PFILLNLAFS LQAAYAAPLI LLAQTRQADR DKATSEADAR
HREAIAMANQ RRQRDAEIHS QQLLQLLEQN THLTEVTK