Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1917 |
Symbol | |
ID | 5192401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2193244 |
End bp | 2193720 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640586379 |
Product | hypothetical protein |
Protein accession | YP_001267246 |
Protein GI | 148547144 |
COG category | [S] Function unknown |
COG ID | [COG4420] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACCCGT TAACCTCTGA TCAGTCGAAA CCTCATGAAA CTCCTGAAGA CGTCGACCAT CTCAGGTTTC ATCGCGCCCA TGAGCATATG CACCACCCCT TTGGTAATGA TGCATTTGCC CGCAGACCCG AAGCTTTCGC CCGTTTCTTT GGCACACCTT TGTTCCTAGG GTCCCAGTCA CTAGTGGTTC TTATTTGGAT GGGTATCAGC TTATCGGGGC TGTCAGCGTT CGATCCCTAC CCCTTCATTC TACTGAATCT AGCGTTTAGT CTGCAGGCGG CCTACGCGGC CCCTCTAATT CTTCTGGCAC AAACTCGCCA AGCCGACCGT GACAAAGCTA CCTCTGAAGC AGACGCACGA CATCGAGAGG CAATTGCCAT GGCCAATCAA CGACGGCAGC GGGACGCAGA GATTCACAGC CAGCAGCTAC TGCAGTTATT GGAGCAAAAT ACACACCTCA CGGAAGTAAC AAAGTAA
|
Protein sequence | MDPLTSDQSK PHETPEDVDH LRFHRAHEHM HHPFGNDAFA RRPEAFARFF GTPLFLGSQS LVVLIWMGIS LSGLSAFDPY PFILLNLAFS LQAAYAAPLI LLAQTRQADR DKATSEADAR HREAIAMANQ RRQRDAEIHS QQLLQLLEQN THLTEVTK
|
| |