| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1897 |
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| Symbol | |
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| ID | 5194049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2172388 |
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| End bp | 2173854 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640586361 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001267229 |
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| Protein GI | 148547127 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.134461 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCT GCTGTCCGGG TGGTCGCCCC GCAGGAGCAC TCGGGGTCTT CAGGCGCTGT
CCAGGCTCGC CGCGTAGAAT GCGCGGCGTG CCCGGCGCGT CGAAAACTGC TGGCCTTAAA
ACAACCACAA AGTCGCCCGC CAGGAGACAG GAAATGCCAA TTGCGAATGC AACCACGGTC
CACAGTGACA TCGACCATGG CACGAAAGCG CTGTACAGCA AGATCACCTG GAGGCTCATC
CCCTTCTTGT GTTTCTGCTA CCTCGCAGCT TATCTGGACC GCATCAATGT CGGCTTCGCG
AAGCTGCAGA TGCTCGAAGA CCTGCAGTTC AGCACAGCGG CCTATGGCCT GGGTGCAGGG
CTGTTCTTCG TCGGCTACAT CATCTTCGAA GTACCGAGCA ACCTGATCCT GCAGCGCGTT
GGCGCCAAGC TGTGGATCGC CCGCATCATG ATCACCTGGG GCCTGCTGTC GGCCTGCACC
CTGTTCGTCA CCAGCACCAC CCAGTTCTAT ATCCTGCGTT TCCTGCTGGG TGCGGCCGAG
GCCGGCTTCC TGCCAGGCGT GTTGTACTAC CTGACCATGT GGTACCCCAC CTATCGCCGC
GGGCGTATCA TTGCCCTGTT CATGATCGGG CTGCCGTTGT CGAGCGTGAT TGGCGGGCCG
ATTTCTGGCT GGATCATGGG GCATTTCGAC CAGGTTCAAG GTTTGCATGG GTGGCAGTGG
CTGTTCCTGC TGGAGGCGAT CCCCAGCGTT TTGCTCGGCA TCCTCACGTT CTGGGCATTG
CCTAACCATT TTCAGCAGGC CAAGTGGCTG TCGGCTGACG ACAAGGCACA ACTGGCGGCA
GACCTGGCCG CCGACGATGC CGAGGGCAAG GACAGCAAAC ACAGCTTCCG CGATGGCTTC
TTCAACCTTA AGGTGTGGAT GCTCGGTGGT ATCGACTTTT CGATCCTGCT CAGCGCCTAT
GCGATGGGCT TCTGGATGCC GACCTTCATC CGCGATGCGG GCGTCAGCGA CACCTTCCAT
ATCGGCCTGC TCACGGCCAT TCCAAGCCTG GCCGCGCTGG CCGGCATGCT CATGATCGGG
GCCAGCTCCG ACCGCCACCG CGAGCGCCGC TGGCACATCA TCGTGCCGTT CATCATTGGT
GCAATCGCCA TGGCCAGCAG CACCTTGTTC AGCCAGAACC TGGTGATGAC CGTGGTGCTG
TTCGCCATTG CCTCGGCGGC GATCATCGGC GCGGTGCCGG TGTTCTTCAG CCTGCCGGCG
ACCTTCCTCA AAGGCACCGC AGCCGCCACC GGCTTTGCCC TGGCCTGTTC GGTAGCCAAC
ATCGCCGGCT TGGTGAGCAA CTCACTGATG GGCGTGGTCA CCGACCTCAC CGGCACCTCG
CACGCTGCGC TGTGGGTGTT TGCCGGCTGC CTGATCCTCA GCTGCTTCCT GGTCATCGCC
TTGCCGGCCA AGCTGGTCAA CCGCTAG
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| Protein sequence | MTACCPGGRP AGALGVFRRC PGSPRRMRGV PGASKTAGLK TTTKSPARRQ EMPIANATTV
HSDIDHGTKA LYSKITWRLI PFLCFCYLAA YLDRINVGFA KLQMLEDLQF STAAYGLGAG
LFFVGYIIFE VPSNLILQRV GAKLWIARIM ITWGLLSACT LFVTSTTQFY ILRFLLGAAE
AGFLPGVLYY LTMWYPTYRR GRIIALFMIG LPLSSVIGGP ISGWIMGHFD QVQGLHGWQW
LFLLEAIPSV LLGILTFWAL PNHFQQAKWL SADDKAQLAA DLAADDAEGK DSKHSFRDGF
FNLKVWMLGG IDFSILLSAY AMGFWMPTFI RDAGVSDTFH IGLLTAIPSL AALAGMLMIG
ASSDRHRERR WHIIVPFIIG AIAMASSTLF SQNLVMTVVL FAIASAAIIG AVPVFFSLPA
TFLKGTAAAT GFALACSVAN IAGLVSNSLM GVVTDLTGTS HAALWVFAGC LILSCFLVIA
LPAKLVNR
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