Gene Pput_1890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1890 
Symbol 
ID5192810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2166125 
End bp2166598 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content66% 
IMG OID640586354 
Product2Fe-2S iron-sulfur cluster binding domain-containing protein 
Protein accessionYP_001267222 
Protein GI148547120 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACAA CCATCTCCCT GCAGGTCAAC GGCCAGCCCG TCGAAGTCAG CGCCATGCCT 
GACACCCCAC TGCTGCTGAT CCTGCGCAAC GACCTGTCCC TGAACGGCCC CAAGTACGGC
TGCGGCCTGG GCGAGTGTGG GGCGTGTACG GTGATCATCG ATGGCGTGGC CGCCCGCTCC
TGCGTCATCC CCTTGGCCGG CGCCGCCGGC CGCGATATCA CCACCCTCGA AGGGCTGGGC
AGCAAGGCCG CTCCGCACCC GGTGCAACAG GCGTTCATCG ACGAGCAAGC GGCCCAGTGT
GGTTACTGCA TGAACGGCAT GATCATGACC GCCAAGGCCC TGCTCGACCG CATTCCCGAG
CCCAGCGACG AACAGATTCG CAATGAGCTG TCCGGCAACC TGTGCCGCTG TGGCACCCAC
GTCGAAATCC TGCGCGCCGT GCGCCGCGCT GCCGAGACCC GGAGAAAGCC ATGA
 
Protein sequence
MQTTISLQVN GQPVEVSAMP DTPLLLILRN DLSLNGPKYG CGLGECGACT VIIDGVAARS 
CVIPLAGAAG RDITTLEGLG SKAAPHPVQQ AFIDEQAAQC GYCMNGMIMT AKALLDRIPE
PSDEQIRNEL SGNLCRCGTH VEILRAVRRA AETRRKP