| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1888 |
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| Symbol | |
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| ID | 5193890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2161923 |
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| End bp | 2162561 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640586352 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001267220 |
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| Protein GI | 148547118 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACTC GCAAAACCGG TGTTCGCGCC CAGCAGGCCG ACCGCACCCG GGACAATATT
CTCAAGGCCG CAGTGAAGGT CTTCAGCAAG GAAGGCTTCA CTGGTGGGCG CATCGAGCAG
ATCTCCACAC TGGCCAAGTC CAACGACCGG ATGATCTATT ACTACTTCGG CAGCAAGGAA
AAGCTGTTCA TCAGTGTGCT GGAGCACATC TATGCCAGCT TCAACCAGGC CGAAGCGAAG
CTGCGCCTCG ACCTCGCCGA CCCTGAGCAG GCCCTGCGCG AGCTGGTGGC GTTTATCTGG
GACTATTATG TGCGCCACCC CGAATTCGTC ACCATCCTCG CCACCGAAAA CCTTCACCAG
GGCTTGCACG CGCGCAAGTC GCAAAACCTC AGGGCGCTGT CCGGCGAAGC GGTCGGCGTG
CTGCGGCCGA TCATCGAGGC CGGACAAGCA AAGGGCCTGT TCCGCGACGA TATCTGCATT
ACCCACGCCT ACCTGATGAT TGCCTCGCTC TGCTACTTCT ATAACTCCAA CCGCCATACG
CTCAGCTCGT TCCTGGCCGT GGACCTGGCC GACAAGCAGG CCAAGGCCGA TTGGCTGGCC
TTCATCAGTG ACCTTGCGCT GCGCGGCTTG CGCCGCTGA
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| Protein sequence | MQTRKTGVRA QQADRTRDNI LKAAVKVFSK EGFTGGRIEQ ISTLAKSNDR MIYYYFGSKE
KLFISVLEHI YASFNQAEAK LRLDLADPEQ ALRELVAFIW DYYVRHPEFV TILATENLHQ
GLHARKSQNL RALSGEAVGV LRPIIEAGQA KGLFRDDICI THAYLMIASL CYFYNSNRHT
LSSFLAVDLA DKQAKADWLA FISDLALRGL RR
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