| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1877 |
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| Symbol | |
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| ID | 5192758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2149675 |
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| End bp | 2150829 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640586341 |
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| Product | mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_001267209 |
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| Protein GI | 148547107 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0763537 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCATTA CTGCTGTAAC CGTCCAGGTA TTTTCCTACC CCACGCGCCG CGCCGTAGAC
AGCGCCGGCC ATGCCCACCC AGGTGATGTG ACCCAGGCCA GGATGGCCCT GCTGCGCATC
AGGACCGAGT GCGGCAGCGA AGGCTATGCG CTGGCCGCAC CCGAGCTCAT TCGCCCTTAT
GTGCTGGATA ATTTCGTTCG CAAGGTGCTG GTTGGCGCCA ATGCCTTTGA CCGCGAAAAA
ATCTGGCACG ACCTGGCGCA CTGGCAGCGC GGTAGCGCCA GCCAGCTGAC CGATCGTGCC
CTGGCGCTGG TCGAGCAGGC GCTGTGGGAT TGGGCCGGTC GCAAGCTGAA CCTGCCGGTG
CACAAGCTGA TCGGCGGCTA CCGCGACAAG GTGCCGGCCT ATGGCTCGAC CATGTGCGGC
GATGAGCTGC CCGGCGGTCT GTCCACTCCG GAAGAGTACG GTCGCTTCGC CGAAACCCTG
GTCAAGCGTG GCTACAAGGC GATCAAGCTG CACACCTGGA TGCCGCCGGT GTCGTTCGCG
CCCAGCGTGA GCATGGACAT CAAGGCATGC GCCGCCGTGC GCGAGGCCGT GGGGCCGGAC
ATTGCGCTGA TGATCGATGG CTATCACTGG TACAGCCGCA CCGAGGCCCT CACTATCGGC
CGTGCCCTGG AGAAGCTCGA CTTTGCCTGG TTCGAAGAGC CGATGATGGA AGACTCCGCC
GAGTCCTACG CCTGGCTTTC CGGGCAGCTG GATATCCCGG TGCTAGGCCC GGAAAGCCTC
GGCGGCAAGC ACCTGAGCCG GGCGAGCTGG GTCAAGAACG ATGTGTGCGA CATCCTGCGT
GCGGGGGTTG CCGGTGTGGG TGGCATTGCA CCGTGTCTGA AGGTTGCGCA CATGGCCGAA
TCGTTCGGCA TGGATTGCGA GATCCATGGC AACGGCGCCG CCAACCTGGC GGTCGTGGGG
GCAATCAAGA ACTGCACCTG GTACGAGCGC GGTCTGCTGC ACCCCTACCT TGACTACGAC
GAGGTACCTG CCTATCTCAA ACGCCTGGTC GACCCGATGG ACGAAGACGG CTATGTGCAC
CTGTCGAACT TGCCTGGCCT TGGGGAAGAT ATCGACTTCG ACTACGTCGA AACCAATACG
CTGCAAAGCT TCTGA
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| Protein sequence | MIITAVTVQV FSYPTRRAVD SAGHAHPGDV TQARMALLRI RTECGSEGYA LAAPELIRPY
VLDNFVRKVL VGANAFDREK IWHDLAHWQR GSASQLTDRA LALVEQALWD WAGRKLNLPV
HKLIGGYRDK VPAYGSTMCG DELPGGLSTP EEYGRFAETL VKRGYKAIKL HTWMPPVSFA
PSVSMDIKAC AAVREAVGPD IALMIDGYHW YSRTEALTIG RALEKLDFAW FEEPMMEDSA
ESYAWLSGQL DIPVLGPESL GGKHLSRASW VKNDVCDILR AGVAGVGGIA PCLKVAHMAE
SFGMDCEIHG NGAANLAVVG AIKNCTWYER GLLHPYLDYD EVPAYLKRLV DPMDEDGYVH
LSNLPGLGED IDFDYVETNT LQSF
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