| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1871 |
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| Symbol | |
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| ID | 5195550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2143332 |
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| End bp | 2144027 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640586336 |
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| Product | 3-oxoacid CoA-transferase, A subunit |
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| Protein accession | YP_001267204 |
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| Protein GI | 148547102 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.17369 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATCAATA AAACGTACGA GTCCATCGCC AGCGCGGTGG AAGGGATCAC CGACGGTTCG
ACCATCATGG TCGGTGGCTT CGGCACGGCT GGCATGCCGT CCGAGCTGAT CGATGGCCTC
ATTGCCACCG GTGCCCGCGA CCTGACCATC ATCAGCAACA ACGCCGGCAA CGGCGAGATC
GGCCTGGCCG CCCTGCTCAT GGCAGGCAGC GTGCGCAAGG TGATCTGCTC GTTCCCGCGC
CAGTCCGACT CCTACGTGTT CGACGAACTG TACCGGGCGG GCAAGATCGA ACTGGAAGTG
GTCCCGCAGG GCAACCTGGC CGAGCGTATC CGCGCCGCAG GCTCCGGCAT TGGTGCGTTC
TTCTCGCCAA CCGGCTACGG CACCCTGCTG GCCGAGGGCA AGGAAACCCG TGAGATCGAC
GGCCGCATGT ACGTGCTGGA AATGCCGCTG CACGCCGACT TCGCACTGAT CAAGGCACAC
AAGGGTGACC GTTGGGGCAA CCTGACCTAC CGCAAGGCCG CCCGCAACTT CGGCCCGATC
ATGGCCATGG CTGCCAAGAC CGCCATCGCC CAGGTCGACC AGGTCGTCGA ACTCGGTGAA
CTGGACCCGG AACACATCAT CACCCCGGGT ATCTTCGTCC AGCGCGTGGT CGCCGTCACC
GGTGCTGCCG CTTCTTCGAT TGCCAAAGCT GTCTGA
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| Protein sequence | MINKTYESIA SAVEGITDGS TIMVGGFGTA GMPSELIDGL IATGARDLTI ISNNAGNGEI
GLAALLMAGS VRKVICSFPR QSDSYVFDEL YRAGKIELEV VPQGNLAERI RAAGSGIGAF
FSPTGYGTLL AEGKETREID GRMYVLEMPL HADFALIKAH KGDRWGNLTY RKAARNFGPI
MAMAAKTAIA QVDQVVELGE LDPEHIITPG IFVQRVVAVT GAAASSIAKA V
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