| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1870 |
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| Symbol | |
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| ID | 5195549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2142682 |
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| End bp | 2143323 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640586335 |
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| Product | 3-oxoacid CoA-transferase, B subunit |
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| Protein accession | YP_001267203 |
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| Protein GI | 148547101 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.246181 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCATCA CCAAAAAGCT CTCCCGCACC GAGATGGCCC AACGCGTGGC CGCAGACATC
CAGGAAGGCG CGTACGTAAA CCTGGGCATT GGCGCGCCAA CCCTGGTGGC CAACTACCTG
GGCGACAAGG AAGTGTTCCT GCACAGCGAA AACGGCCTGC TGGGCATGGG CCCAAGCCCT
GCGCCGGGCG AGGAAGACGA TGACCTGATC AACGCCGGCA AGCAGCACGT CACCCTGCTG
ACCGGTGGTG CCTTCTTCCA CCATGCCGAT TCGTTCTCGA TGATGCGTGG CGGCCACCTG
GACATCGCCG TACTGGGTGC CTTCCAGGTG TCGGTCAAGG GCGACCTGGC CAACTGGCAC
ACGGGTGCCG AAGGTTCGAT CCCGGCCGTA GGCGGCGCAA TGGACCTGGC CACCGGCGCC
CGCCAGGTGT TCGTGATGAT GGACCACCTG ACCAAGACCG GCGAAAGCAA GCTGGTGCCC
GAGTGCACCT ACCCGCTGAC CGGTATCGCG TGCGTCAGCC GCATCTACAC CGACCTGGCC
GTGCTGGAAG TGACACCGGA AGGGCTGAAA GTGGTCGAAA TCTGCGCGGA CATCGACTTT
GACGAACTGC AGAAACTCAG TGGCGTACCG CTGATCAAGT AA
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| Protein sequence | MTITKKLSRT EMAQRVAADI QEGAYVNLGI GAPTLVANYL GDKEVFLHSE NGLLGMGPSP
APGEEDDDLI NAGKQHVTLL TGGAFFHHAD SFSMMRGGHL DIAVLGAFQV SVKGDLANWH
TGAEGSIPAV GGAMDLATGA RQVFVMMDHL TKTGESKLVP ECTYPLTGIA CVSRIYTDLA
VLEVTPEGLK VVEICADIDF DELQKLSGVP LIK
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