Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1865 |
Symbol | |
ID | 5191495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 2135381 |
End bp | 2136589 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640586330 |
Product | major facilitator transporter |
Protein accession | YP_001267198 |
Protein GI | 148547096 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0835238 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTCAGTA CCTACCGCGA GTTGTTCCAG GCCAGAGGCG CCAAGGGCTT CGCCTTGGCC GGCCTGCTGG CCCGGCTGCC GTTGCCGATG ACCGGTATCG GGATCATCAC CATGTTGTCT CAGATCACCG GCAGTTATGG CCTGGCCGGT GCGGTGGCGG CCACCTTCGT GCTGACCTAT GCACTGATGT CGCCGCAGAT CTCGCGCCTG GTCGACCGCC ATGGCCAGGG CCGCTTATTG CCGGCCGCCG CCGGGCTCAG TGTGCTGGGC ATCCTTCTGC TGTTGGCTTG CAGCTATTGG CGGCTGGCGG ACTGGACCCT ATTCGTCGGG GCCGCGCTCG CCGGCTTCAT GCCCAGCATG TCGGCGATGG TGCGCGCGCG CTGGACCGCG ATTTACCGCG GCAAGGCGCA ACTGAAGACA GCCTACTCGC TGGAAACCGT TCTTGACGAA GTCACCTTCA TTGCTGGCCC GCCGATTTCG GTAGGGCTGA GCGTGGCGGT ACTTCCGCAG GCCGGTACAT TGGCTGCTGC CGTGTTCCTG GCCGTCGGCG TGTTCGCCTT GGCGGTGCAG GTCGGCACCG AGCCGCCAGT AGAGGCCGAT GCCGCCACCG GGCAAGACAG CATGTCGGTG TTCAGGCTGG CCGACGTACG CCTGCTGACC TTGCTGATGG TCGCTATGGG CTTGATCGTC GGTACGGTCG ACATCGTCAG CGTGGCATTC GCCGAGCAGA TGGACATGCC GGCTGCGGCC AGCGTGGTGC TGTCCTGTTA TGCCATCGGC TCCTGTGTCG CGGGGCTGGT GTTCGGTGTC CTGAAACTCG ATACCCCGCT ACACAAGCTG CTACTGCTGG GTGGGTTGGC GACGGCGGCG ACAACCTTGC CGCTGCTGGT GGTGGGAGAC ATCATCGGGC TGGCCATTGC CGTGCTGGTT GCGGGCCTGT TCTTCGCCCC GACCATGATC GTGGCGATGT CGCTGGTAGA GCGCATCGTT CCCGAAAGCA AGCTGACTGA AGGGATGACC TGGTTGCTCG CCGGTCTCAA CGTTGGAGTT GCCGGCGGTG CCGCAGCGTC TGGGCAGGTG GTCGATATGT GGGGTGCCCA GGCCGGATTC AACGTGGCCT TGGCCGCCGG GGCCGCAGTG TTGTTGGTCG CGCTTTGGGG CTACCAGCGC ATGCGCGCCC GAGCCCGACA GGCGTCGTAT TCGCTTTGA
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Protein sequence | MFSTYRELFQ ARGAKGFALA GLLARLPLPM TGIGIITMLS QITGSYGLAG AVAATFVLTY ALMSPQISRL VDRHGQGRLL PAAAGLSVLG ILLLLACSYW RLADWTLFVG AALAGFMPSM SAMVRARWTA IYRGKAQLKT AYSLETVLDE VTFIAGPPIS VGLSVAVLPQ AGTLAAAVFL AVGVFALAVQ VGTEPPVEAD AATGQDSMSV FRLADVRLLT LLMVAMGLIV GTVDIVSVAF AEQMDMPAAA SVVLSCYAIG SCVAGLVFGV LKLDTPLHKL LLLGGLATAA TTLPLLVVGD IIGLAIAVLV AGLFFAPTMI VAMSLVERIV PESKLTEGMT WLLAGLNVGV AGGAAASGQV VDMWGAQAGF NVALAAGAAV LLVALWGYQR MRARARQASY SL
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