Gene Pput_1855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1855 
Symbol 
ID5192380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2128175 
End bp2128981 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content49% 
IMG OID640586322 
Producthypothetical protein 
Protein accessionYP_001267190 
Protein GI148547088 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0268826 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCTTGTC AGGTCAATTT TGCAAATGGT GCGCCGAGAG CATTTTCGAG TTCTTCTATG 
GAAAACAACT CTTTCCGATT TGCCTGCAAC GGATGTGGGG TCCGCTGTAA AGGACGGCTG
ATTCCACTTA CGCTGTATGA AACGAGGCAG TGGCTACACA GAGGGCATGA GGTAGCAATT
CTGCTTGAGG CATTTGACGA GCTTCATTGG AGTTCAAGTC CGGAGGAGTT TGCTCATGCC
AAAGGCCGAG CCGTGGAGGT CACCAGTGGT CATGCCTCAA TCTATGTCAT TGCAGTATTC
GCGGGCAATG CCCTAAATGG CTGTCAGAAC CTGGGTGATA ACAACCTTTG CGGCATCTAT
GACGAGCGTC CGTTGGTATG TCGAATCTAT CCTGCGGAAA TAAATCCGTT CATCCCACTG
AATCCTGCGA GCAAAATCTG TCCGCCTGAG GTATGGGATG AAGGTGAAGT ATTATTTACT
GACCGTATCA TTGACCCCGT TCTGGCGAAA CAGATTGAGT GCTCTCGAAA AGCAGATAGA
GACGATGCTC GGGCTAAAAT CGCTGTCTGT GAAATCTTAG GGCTAAATGT TGCTGCGTGG
AAAGGCAATG CATTTACTGT GTACCTGCTT GATCGAGAAC AGCTACTCGA TGCTTTTGTT
TTTTACGACG CACTCATGAG AGCTAGCCAA ATTCGAACGG ATTGGAAAGT CCGGGTCGAC
ATTCCAGTTC TGCGGCAGAG ACTTAAACAG GCTGGTGTGG CATTGGATGG CCAAGAGGGA
GGTGACTATA TATTTCATCC GCTTTAG
 
Protein sequence
MPCQVNFANG APRAFSSSSM ENNSFRFACN GCGVRCKGRL IPLTLYETRQ WLHRGHEVAI 
LLEAFDELHW SSSPEEFAHA KGRAVEVTSG HASIYVIAVF AGNALNGCQN LGDNNLCGIY
DERPLVCRIY PAEINPFIPL NPASKICPPE VWDEGEVLFT DRIIDPVLAK QIECSRKADR
DDARAKIAVC EILGLNVAAW KGNAFTVYLL DREQLLDAFV FYDALMRASQ IRTDWKVRVD
IPVLRQRLKQ AGVALDGQEG GDYIFHPL