Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1855 |
Symbol | |
ID | 5192380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 2128175 |
End bp | 2128981 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640586322 |
Product | hypothetical protein |
Protein accession | YP_001267190 |
Protein GI | 148547088 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0268826 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCTTGTC AGGTCAATTT TGCAAATGGT GCGCCGAGAG CATTTTCGAG TTCTTCTATG GAAAACAACT CTTTCCGATT TGCCTGCAAC GGATGTGGGG TCCGCTGTAA AGGACGGCTG ATTCCACTTA CGCTGTATGA AACGAGGCAG TGGCTACACA GAGGGCATGA GGTAGCAATT CTGCTTGAGG CATTTGACGA GCTTCATTGG AGTTCAAGTC CGGAGGAGTT TGCTCATGCC AAAGGCCGAG CCGTGGAGGT CACCAGTGGT CATGCCTCAA TCTATGTCAT TGCAGTATTC GCGGGCAATG CCCTAAATGG CTGTCAGAAC CTGGGTGATA ACAACCTTTG CGGCATCTAT GACGAGCGTC CGTTGGTATG TCGAATCTAT CCTGCGGAAA TAAATCCGTT CATCCCACTG AATCCTGCGA GCAAAATCTG TCCGCCTGAG GTATGGGATG AAGGTGAAGT ATTATTTACT GACCGTATCA TTGACCCCGT TCTGGCGAAA CAGATTGAGT GCTCTCGAAA AGCAGATAGA GACGATGCTC GGGCTAAAAT CGCTGTCTGT GAAATCTTAG GGCTAAATGT TGCTGCGTGG AAAGGCAATG CATTTACTGT GTACCTGCTT GATCGAGAAC AGCTACTCGA TGCTTTTGTT TTTTACGACG CACTCATGAG AGCTAGCCAA ATTCGAACGG ATTGGAAAGT CCGGGTCGAC ATTCCAGTTC TGCGGCAGAG ACTTAAACAG GCTGGTGTGG CATTGGATGG CCAAGAGGGA GGTGACTATA TATTTCATCC GCTTTAG
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Protein sequence | MPCQVNFANG APRAFSSSSM ENNSFRFACN GCGVRCKGRL IPLTLYETRQ WLHRGHEVAI LLEAFDELHW SSSPEEFAHA KGRAVEVTSG HASIYVIAVF AGNALNGCQN LGDNNLCGIY DERPLVCRIY PAEINPFIPL NPASKICPPE VWDEGEVLFT DRIIDPVLAK QIECSRKADR DDARAKIAVC EILGLNVAAW KGNAFTVYLL DREQLLDAFV FYDALMRASQ IRTDWKVRVD IPVLRQRLKQ AGVALDGQEG GDYIFHPL
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