| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1852 |
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| Symbol | |
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| ID | 5192721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2125589 |
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| End bp | 2126491 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640586319 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001267187 |
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| Protein GI | 148547085 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0275595 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATCGTC TGCTACTGAT GACATGCTTT GTACGCACTG TGGAAACGGG TAGCTTCTCG
TCGGCAGGTC GAGATTTAGG CCTTGGCCAA CCGAACGTAA GCCGCTATGT AGCCGCCTTG
GAAGATCATC TGAAAACTCG ATTGCTTCAC AGGTCTACCA GGAAGCTGTC ACTCACGTCT
GAAGGAGAGC GGTACTACGC GGATGCACGC CGAATTCTCG ATGCAGTAGC TGAATCGGAA
TCAGCACTGA AGAACGACGT TCCGCCTTCT GGGTTGCTGA GGGTGGCCTG CCCTACTGCT
CTGGCACATA CCTTTATCGT TCCTGAAATA CCCAGATTTC TAAGCCTTTA TCCGGAAATG
ACCCTAGACC TGCAGATTAA TGATCGCTTC GTAAACCTTG TAGATGAGGG TGCTGACCTA
GCACTGCGGA TCGGTCACTT CGATGACAAG ACACTTAGAA CTAAACAATT AGGTTCATTC
AAGCGCGTAT GCGTCGCTAG TTCAGATTAT TTGGCCAAGC GTGGCACCCC TTCGACGCCA
GAAGATCTCG AAAATCATGA CTGTATAATT TATACATTGT TAAGCACCGG GGCCACATGG
CGTTTTCGTA ATGTGGACAT ACCTGTCACC GGAAAGCTCA GAGTAAACTC TCCAGAAGCT
ACCCGAGAGT TGGTCAATGC GGGTGTGGGG ATAGCACAAG GGCCCGAATG GCTATACGAG
GCGGGCTTGA GCAATGGAAA TCTTAAACTG ATACTTCAGG AGTTTTATCC GCCTCCCGTA
CCTATCCAGT TTGTTTACAT TGCGGATCGG CTAATGCCTA AAAGAGCGCT GGTATTCATG
GAGTTTATAG CGGAAGCATT CGCCAACAGC TCCGTGATTG ACGAACGCCA TGCCTCACCC
TAG
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| Protein sequence | MDRLLLMTCF VRTVETGSFS SAGRDLGLGQ PNVSRYVAAL EDHLKTRLLH RSTRKLSLTS
EGERYYADAR RILDAVAESE SALKNDVPPS GLLRVACPTA LAHTFIVPEI PRFLSLYPEM
TLDLQINDRF VNLVDEGADL ALRIGHFDDK TLRTKQLGSF KRVCVASSDY LAKRGTPSTP
EDLENHDCII YTLLSTGATW RFRNVDIPVT GKLRVNSPEA TRELVNAGVG IAQGPEWLYE
AGLSNGNLKL ILQEFYPPPV PIQFVYIADR LMPKRALVFM EFIAEAFANS SVIDERHASP
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