| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1847 |
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| Symbol | |
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| ID | 5193793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2117851 |
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| End bp | 2119242 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640586315 |
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| Product | type III effector Hrp-dependent outer |
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| Protein accession | YP_001267183 |
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| Protein GI | 148547081 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0264815 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCCC ATCACGTTAC CAAGCTGCCG TTGGTCTTTT ATGGTGATGA CTTCACTGGC
TCGACCGATG CTCTAGAGGT TCTGACGGCT GCTGGACTTA AATGTGCCCT GTTCCTCGCT
CCTCCGACCC CAGAACGCCT GGCGGAACTC GGCGAATTTG ACGCCATCGG CATCGCTGGT
GATAGCCGTG CTTTGTCCAA TGGCGAGATG GATGCGGTGT TGCCCGGGAT TTTTGAGGGC
ATCAAACGTC TATCGCCAGC GTTGATTCAC TACAAGGTTT GCTCGACTTT TGACAGTGCC
GACTCCGTGG GCAGCATTGG GCACGTCATT GAGCTGGCAT CTCGCATCTA TGATGTCAAA
GGGATCCCGA TCATTGCAGG CAATCCCGCA TTGGGCCGCT ACTGCGTTTT CGGCAACCTC
TATGCCTTGT CCAAGACAGA TCACAAGGTT CACAGGATTG ACCGGCACCC TATCATGAGT
GCCCACCCGA TTACCCCGAT GCATGAAGCG GACTTGAGTA TCCATATCGG CAAGCAAAAG
AGCTTGTCGA TTGGCAAAGT CGATATTCGC CAGCTCGAAA AGACTGCAGA GCTCAGCCGA
TTAGTCGACG AGATGACACA GCAGCATGAT GCAGTGCTGT TTGATGGTAC CGACGACTCT
CATATGACCA CCGCTGGCCA AGTATTGACC GAGCTTTCAT CAGGCGCAGC TCCAGTCTTC
GTCGTCGGTT CTTCCGGCGT GGAGTACGGC CTCACACAAT ATTGGCGTAC CGCTGGGGTG
TTTCCGCCAC GAGCGTCGCT GGCCGTACCT CTGAAACCTG CAGACCAGGT ACTGGTTATC
TCAGGCAGTG CTTCGCCGTT GAGTCAGTCC CAGATTGAAA CGGCAATTGA TTACGGGTTT
GTAGAGCTTG AAGTCGATGC TGCCGCATTG ATTACTGAGT CCCGAAAAAG TGCCGCAATA
CGAGATGTGG TCATGGCCGC TGTATCCCAC CTGGAAGAGG GGCGGTCGGT TCTGATTCAC
ACTGCCAAAG GCCCATGCGA TTCTCGGATC GAGCAGATGA TCGAGGCAAT GCTGCAAAAA
GGCCTGCCTC GTGATGAGGC GAGGGTTCAG GGTGGGAAGC AGCTAGCAAT GGAAGTGGGT
CAAGTTGCGC TTGAAATCCT TAAGGCATTC CCGTTGAAAA GATTGGTGGT TTCGGGCGGC
GACACATCGA GCCAAGTAAC CAAAGTGCTT GCACCCGATG CTCTGGTTAT CAAGTCTGAT
ATTTCTCCCG GCGCTCCTTT GTGCCAAATG CACTCTCGCG AGCCGTACCT AAAGGATGTG
GAGATTGCTC TCAAAGGTGG GCAGATGGGA GATCGTGATT ATTTCGTCAA AGCACTCAGA
GGTCTTGAAT AA
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| Protein sequence | MTSHHVTKLP LVFYGDDFTG STDALEVLTA AGLKCALFLA PPTPERLAEL GEFDAIGIAG
DSRALSNGEM DAVLPGIFEG IKRLSPALIH YKVCSTFDSA DSVGSIGHVI ELASRIYDVK
GIPIIAGNPA LGRYCVFGNL YALSKTDHKV HRIDRHPIMS AHPITPMHEA DLSIHIGKQK
SLSIGKVDIR QLEKTAELSR LVDEMTQQHD AVLFDGTDDS HMTTAGQVLT ELSSGAAPVF
VVGSSGVEYG LTQYWRTAGV FPPRASLAVP LKPADQVLVI SGSASPLSQS QIETAIDYGF
VELEVDAAAL ITESRKSAAI RDVVMAAVSH LEEGRSVLIH TAKGPCDSRI EQMIEAMLQK
GLPRDEARVQ GGKQLAMEVG QVALEILKAF PLKRLVVSGG DTSSQVTKVL APDALVIKSD
ISPGAPLCQM HSREPYLKDV EIALKGGQMG DRDYFVKALR GLE
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