| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1834 |
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| Symbol | |
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| ID | 5193098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2106135 |
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| End bp | 2107526 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640586302 |
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| Product | uroporphyrin-III C-methyltransferase |
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| Protein accession | YP_001267171 |
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| Protein GI | 148547069 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase
[COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) |
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| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase
[TIGR01470] siroheme synthase, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000289405 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGATTACC TGCCGCTGTT CCACAAGCTG CAGGGCGGCC GCGTGCTGGT CGTCGGTGGC
GGTGAGATCG CCTTGCGCAA GGCGCGCCTG CTGGCCGATG CCGGCGGCGT GCTGCGCGTG
GTGGCGCCGG ACGTCGACGG CCAGTTGGCC GCGTTGGCCC GGGAAGGTGG CGGTGAGGTG
CTGGTGCGTG GCTATCAGGC AGCCGACCTG GTCGGTTGCC GGCTGGTGAT CGCGGCCACC
GACGACCCTG GGCTGAATGC CCAGGTGTCG GCTGATGCGC AGGCCCTTAG CGTCCCGGTC
AATGTGGTGG ATGCGCCAGC CCTGTGTACG GTGATCTTCC CGGCGATCGT AGACCGCTCG
CCGCTGGTAA TTGCGGTTTC CAGCGGCGGT GACGCCCCGG TACTGGCGCG CCTGATTCGC
GCCAAGCTCG AGGCTTGGAT CCCTTCGGCC TATGGTGAAC TGGCCGGGCT GGCGGCACGC
TTCCGGCACA AGGTCAAATC CCTGTACCCG GACGTCAACC AGCGTCGTGG CTTCTGGGAA
ACCGTGTTCC AGGGGCCGAT CGCCGAGCGT CAGCTGGCCG GGCAGGGTGC TGAAGCCGAA
CGTCTGTTGC AGGCGATGGT GGACGGCGCA CCGGTGCAGC AGGGCGGTGA GGTGTACTTG
GTTGGTGCCG GCCCGGGTGA TCCGGACTTG CTGACCTTCC GTGCCTTGCG CCTGATGCAG
CAGGCCGACG TGGTGCTGTA CGACCGCCTG GTCGCACCCG CCATCATCGA TATGTGTCGT
CGTGATGCCG AGCGCATCTA TGTAGGCAAG CGCCGCGCTG ATCATTCAGT GCCGCAGGAC
CAGATCAACC GCCTGTTGGT CGATCTGGCT CGGCAGGGCA AGCGGGTGCT GCGCCTGAAG
GGTGGCGACC CGTTCATCTT CGGCCGGGGC GGCGAAGAGA TCGAAGAGCT GGCCGAGCAT
GGCATTCCGT TCCAGGTGGT GCCGGGCATT ACCGCGGCCA GCGGCTGCTC GGCGTATGGC
GGCATTCCGC TGACTCACCG CGACTATGCC CAGTCGGTGC GCTTCGTTAC CGGGCACCTC
AAGGACGGCA CAAGCAACCT GCCGTGGACT GACCTGGTGG CGCCGGCGCA GACCTTGGTG
TTCTACATGG GGTTGGTGGG CTTGCCGACC ATCTGTGCCG AGCTGATTCG CCACGGGCGT
GCCGCGAGTA CCCCGGCGGC GTTGGTGCAG CAGGGGACCA CGCGTAATCA GCGCGTGTTC
ACCGGCACCT TGGCGGACTT GCCAGACCTG GTGGCCCAGC ACGAGGTGCA TGCGCCGACC
CTGGTGATTG TGGGGGAGGT GGTGCAGTTG CGTGACAAGC TGGCCTGGTT CGAAGGTTCG
CAGAACAGCT GA
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| Protein sequence | MDYLPLFHKL QGGRVLVVGG GEIALRKARL LADAGGVLRV VAPDVDGQLA ALAREGGGEV
LVRGYQAADL VGCRLVIAAT DDPGLNAQVS ADAQALSVPV NVVDAPALCT VIFPAIVDRS
PLVIAVSSGG DAPVLARLIR AKLEAWIPSA YGELAGLAAR FRHKVKSLYP DVNQRRGFWE
TVFQGPIAER QLAGQGAEAE RLLQAMVDGA PVQQGGEVYL VGAGPGDPDL LTFRALRLMQ
QADVVLYDRL VAPAIIDMCR RDAERIYVGK RRADHSVPQD QINRLLVDLA RQGKRVLRLK
GGDPFIFGRG GEEIEELAEH GIPFQVVPGI TAASGCSAYG GIPLTHRDYA QSVRFVTGHL
KDGTSNLPWT DLVAPAQTLV FYMGLVGLPT ICAELIRHGR AASTPAALVQ QGTTRNQRVF
TGTLADLPDL VAQHEVHAPT LVIVGEVVQL RDKLAWFEGS QNS
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