Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1833 |
Symbol | |
ID | 5191139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 2104854 |
End bp | 2106134 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640586301 |
Product | seryl-tRNA synthetase |
Protein accession | YP_001267170 |
Protein GI | 148547068 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0172] Seryl-tRNA synthetase |
TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000844174 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCTCGATT CCAAACTGTT ACGCGGCCAA CTTCAGGAAG TGGCGGATCG CCTGGCCTCC CGTGGCTTCA GCCTGGATGT CGCGCGCATC GAATCACTGG AAGAGCGCCG CAAGGCGGTG CAGACCCGCA CCGAACAGCT GCAGGCTGAG CGTAACGCCC GTTCCAAGTC CATCGGCCAG GCCAAGGCCA AGGGTGAAGA CATCGCCCCG CTGATGGCGG ACGTCGAGCG CATGGCCAAC GAACTGGCTG CCGGCAAGGC TGAGCTGGAC GCCATTCAGG CCGAACTGGA TAGCATCTTG CTGACCATTC CCAACCTGCC GGACGCCAGC GTGCCGGTCG GCGCCAGTGA AGACGACAAC GTCGAAGTGC GCCGTTGGGG CACGCCGAAG GCGTTCGACT TCGAAATCAA GGACCATGTG GCCCTCGGTG AAATCAGCCG TGGCCTGGAC TTCGAAGCGG CTGCCAAGCT GTCCGGTGCC CGTTTTGCTG TGCTGCGTGG TCCGGTTGCC CGTCTGCACC GCGCCCTGGC GCAGTTCATG ATCAACCTGC ACACCGGCGA ACATGGCTAC GAGGAACACT ACACCCCGTA CATGGTGCAG GCGCCCGCGC TGCAGGGCAC TGGCCAGTTG CCGAAGTTTG AGGAAGACCT GTTCAAGATC ACCCGCGAAG GCGAGGCTGA CTTCTACCTG ATCCCGACCG CCGAAGTGTC GCTGACCAAC CTGGTGGCGG GTGAAATCCT CGACGCCAAG CAGCTGCCGC TCAAACTGGT TGCCCACACC CCTTGCTTCC GCAGCGAAGC CGGCGCTTCT GGCCGTGACA CCCGCGGCAT GATCCGCCAG CACCAGTTCG ACAAAGTCGA GATGGTGCAG GTGGTAGAGC CGTCCAAGTC GATGGAAGCC CTGGAAGGCC TGACCGCCAA TGCCGAGCGC GTGCTGCAGT TGCTTGAGTT GCCATACCGC GTGCTGGCCC TGTGCACTGG CGACATGGGC TTTGGTGCGG TGAAAACCTA CGACCTGGAA GTGTGGGTGC CAAGCCAGGA CAAGTACCGC GAAATCAGCT CGTGCTCCAA CTGTGGTGAC TTCCAGGCGC GCCGCATGCA GGCTCGCTGG CGTAACCCGG AAACCGGCAA GCCAGAGCTG GTACACACGC TCAACGGCTC CGGTCTGGCC GTAGGCCGTA CCCTGGTGGC TGTGCTGGAG AACTACCAGC AGGCCGACGG TTCGATCCTG GTGCCGGAAG TGCTGAAGCC TTACATGGGC GGCGTCGAGG TCATCCGCTA A
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Protein sequence | MLDSKLLRGQ LQEVADRLAS RGFSLDVARI ESLEERRKAV QTRTEQLQAE RNARSKSIGQ AKAKGEDIAP LMADVERMAN ELAAGKAELD AIQAELDSIL LTIPNLPDAS VPVGASEDDN VEVRRWGTPK AFDFEIKDHV ALGEISRGLD FEAAAKLSGA RFAVLRGPVA RLHRALAQFM INLHTGEHGY EEHYTPYMVQ APALQGTGQL PKFEEDLFKI TREGEADFYL IPTAEVSLTN LVAGEILDAK QLPLKLVAHT PCFRSEAGAS GRDTRGMIRQ HQFDKVEMVQ VVEPSKSMEA LEGLTANAER VLQLLELPYR VLALCTGDMG FGAVKTYDLE VWVPSQDKYR EISSCSNCGD FQARRMQARW RNPETGKPEL VHTLNGSGLA VGRTLVAVLE NYQQADGSIL VPEVLKPYMG GVEVIR
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