| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1833 |
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| Symbol | |
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| ID | 5191139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2104854 |
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| End bp | 2106134 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640586301 |
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| Product | seryl-tRNA synthetase |
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| Protein accession | YP_001267170 |
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| Protein GI | 148547068 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0172] Seryl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000844174 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCTCGATT CCAAACTGTT ACGCGGCCAA CTTCAGGAAG TGGCGGATCG CCTGGCCTCC
CGTGGCTTCA GCCTGGATGT CGCGCGCATC GAATCACTGG AAGAGCGCCG CAAGGCGGTG
CAGACCCGCA CCGAACAGCT GCAGGCTGAG CGTAACGCCC GTTCCAAGTC CATCGGCCAG
GCCAAGGCCA AGGGTGAAGA CATCGCCCCG CTGATGGCGG ACGTCGAGCG CATGGCCAAC
GAACTGGCTG CCGGCAAGGC TGAGCTGGAC GCCATTCAGG CCGAACTGGA TAGCATCTTG
CTGACCATTC CCAACCTGCC GGACGCCAGC GTGCCGGTCG GCGCCAGTGA AGACGACAAC
GTCGAAGTGC GCCGTTGGGG CACGCCGAAG GCGTTCGACT TCGAAATCAA GGACCATGTG
GCCCTCGGTG AAATCAGCCG TGGCCTGGAC TTCGAAGCGG CTGCCAAGCT GTCCGGTGCC
CGTTTTGCTG TGCTGCGTGG TCCGGTTGCC CGTCTGCACC GCGCCCTGGC GCAGTTCATG
ATCAACCTGC ACACCGGCGA ACATGGCTAC GAGGAACACT ACACCCCGTA CATGGTGCAG
GCGCCCGCGC TGCAGGGCAC TGGCCAGTTG CCGAAGTTTG AGGAAGACCT GTTCAAGATC
ACCCGCGAAG GCGAGGCTGA CTTCTACCTG ATCCCGACCG CCGAAGTGTC GCTGACCAAC
CTGGTGGCGG GTGAAATCCT CGACGCCAAG CAGCTGCCGC TCAAACTGGT TGCCCACACC
CCTTGCTTCC GCAGCGAAGC CGGCGCTTCT GGCCGTGACA CCCGCGGCAT GATCCGCCAG
CACCAGTTCG ACAAAGTCGA GATGGTGCAG GTGGTAGAGC CGTCCAAGTC GATGGAAGCC
CTGGAAGGCC TGACCGCCAA TGCCGAGCGC GTGCTGCAGT TGCTTGAGTT GCCATACCGC
GTGCTGGCCC TGTGCACTGG CGACATGGGC TTTGGTGCGG TGAAAACCTA CGACCTGGAA
GTGTGGGTGC CAAGCCAGGA CAAGTACCGC GAAATCAGCT CGTGCTCCAA CTGTGGTGAC
TTCCAGGCGC GCCGCATGCA GGCTCGCTGG CGTAACCCGG AAACCGGCAA GCCAGAGCTG
GTACACACGC TCAACGGCTC CGGTCTGGCC GTAGGCCGTA CCCTGGTGGC TGTGCTGGAG
AACTACCAGC AGGCCGACGG TTCGATCCTG GTGCCGGAAG TGCTGAAGCC TTACATGGGC
GGCGTCGAGG TCATCCGCTA A
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| Protein sequence | MLDSKLLRGQ LQEVADRLAS RGFSLDVARI ESLEERRKAV QTRTEQLQAE RNARSKSIGQ
AKAKGEDIAP LMADVERMAN ELAAGKAELD AIQAELDSIL LTIPNLPDAS VPVGASEDDN
VEVRRWGTPK AFDFEIKDHV ALGEISRGLD FEAAAKLSGA RFAVLRGPVA RLHRALAQFM
INLHTGEHGY EEHYTPYMVQ APALQGTGQL PKFEEDLFKI TREGEADFYL IPTAEVSLTN
LVAGEILDAK QLPLKLVAHT PCFRSEAGAS GRDTRGMIRQ HQFDKVEMVQ VVEPSKSMEA
LEGLTANAER VLQLLELPYR VLALCTGDMG FGAVKTYDLE VWVPSQDKYR EISSCSNCGD
FQARRMQARW RNPETGKPEL VHTLNGSGLA VGRTLVAVLE NYQQADGSIL VPEVLKPYMG
GVEVIR
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