Gene Pput_1830 details

Gene Information

• Locus tag: Pput_1830
• Symbol: lolA
• ID: 5195298
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas putida F1
• Kingdom: Bacteria
• Replicon accession: NC_009512
• Strand: +
• Start bp: 2102491
• End bp: 2103114
• Gene Length: 624 bp
• Protein Length: 207 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 640586298
• Product: outer-membrane lipoprotein carrier protein
• Protein accession: YP_001267167
• Protein GI: 148547065
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2834] Outer membrane lipoprotein-sorting protein
• TIGRFAM ID: [TIGR00547] periplasmic chaperone LolA

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 12
• Fosmid unclonability p-value: 0.0153108
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGCGCGA TTCGCATGCT GTTGGTTTCT GCCCTTACCC TGGGCTCGGT TACTGCTTAT 
GCCGGTGAGC AAGACGTACA ACGCCTGACC CAGTTGCTGG AAAAGTCGCA GACCATCGAG 
GCCAACTTCT CCCAGCTGAC CCTGGGCGCC GATGGCACCA GCCTGCAGGA AACCTCGGGC 
AAGATGACGG TCAAGCGCCC GGGCCTGTTC TACTGGCACA CCGATGCACC GCAGGAGCAG 
GTGGTGGTGT CGGACGGCAA GAACGTCACC CTGTGGGACC CGGACCTGGA GCAGGCCACC 
ATCAAGAAGC TCGACGTGCG CCTGAACCAG ACCCCGGCGC TGCTGCTGTC GGGGGATGTG 
TCGAAGATCA GCCAGAGCTT CGACATCGCC TCGAAGGAGC AGGGTGAGGT GATGGACTTC 
ACCCTCAAGC CAAAGACCAA GGACACGTTG TTCGACTCGC TGCGCGTGTC GTTCCGCAAA 
GGCCTGATCA ATGACATGCA GCTGATCGAC AGCGTCGGCC AGCGCACCAA CATCCTGTTC 
AATGGCGTCA AGGCCAACCA GGCGGTGCCG GACAGCAAGT TCAAGTTCGA CATCCCCAAA 
GGCGCGGACG TGATCAAGGA GTAA 

 

Protein sequence

MRAIRMLLVS ALTLGSVTAY AGEQDVQRLT QLLEKSQTIE ANFSQLTLGA DGTSLQETSG 
KMTVKRPGLF YWHTDAPQEQ VVVSDGKNVT LWDPDLEQAT IKKLDVRLNQ TPALLLSGDV 
SKISQSFDIA SKEQGEVMDF TLKPKTKDTL FDSLRVSFRK GLINDMQLID SVGQRTNILF 
NGVKANQAVP DSKFKFDIPK GADVIKE