Gene Pput_1824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1824 
SymbolclpS 
ID5194698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2095012 
End bp2095374 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content54% 
IMG OID640586292 
ProductATP-dependent Clp protease adaptor protein ClpS 
Protein accessionYP_001267161 
Protein GI148547059 
COG category[S] Function unknown 
COG ID[COG2127] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.507725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.064259 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGCAC CTAGTGAGAT TCGACTAACA TTCAATCAGG ATCGCCCGCA ATCGAATGAG 
GACGACGGCT CAGGTCTTGC AGTTCAGGAA GCCAAGCCGA TCCTGCAGGC GCCACCGATG
TACAAGGTGG TTTTGTTCAA CGATGACTAC ACACCAATGG ATTTCGTCGT CGAAGTGCTC
GAGACGTTCT TCAGTCTGAA CCGCGAGCTG GCGACCAAGA TCATGCTGAC CGTCCATACC
GAGGGGCGGG CAGTGTGCGG ATTGTTTACC CGTGACATCG CCGAAACAAA GGCCATGCAG
GTCAACCAAT ACGCCAGGGA AAGCCAGCAT CCGCTACTCT GTGAAATCGA GAAGGACGGT
TAA
 
Protein sequence
MHAPSEIRLT FNQDRPQSNE DDGSGLAVQE AKPILQAPPM YKVVLFNDDY TPMDFVVEVL 
ETFFSLNREL ATKIMLTVHT EGRAVCGLFT RDIAETKAMQ VNQYARESQH PLLCEIEKDG