| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1817 |
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| Symbol | |
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| ID | 5191522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2086564 |
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| End bp | 2087982 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640586285 |
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| Product | adenylosuccinate lyase |
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| Protein accession | YP_001267154 |
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| Protein GI | 148547052 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0015] Adenylosuccinate lyase |
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| TIGRFAM ID | [TIGR00928] adenylosuccinate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0945132 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATGATA TGCGCCCTTC CAAAAGCCTG ACTGTCCGAG AACACCCCAT GCAGCTTTCT
TCGCTCACTG CGGTTTCCCC TGTAGACGGC CGTTATGCCG GCAAAACCCA GGCCTTGCGC
CCCATTTTCA GCGAATTCGG CCTGATCCGT TTCCGCGCCC TGGTCGAAGT GCGCTGGCTG
CAGCGCCTGG CCGCCCACCC GCAAATCGGC GAAGTGCCGG CGTTCTCCGC CGAAGCCAAC
GCCCTGCTGG ACAGCCTGGC CAACGATTTC AAGCTGGAGC ACGCCGAGCG CGTCAAGGAA
ATCGAGCGCA CCACCAACCA CGACGTCAAG GCCATTGAAT ACCTCCTCAA GGAGCAGGCC
GCCAAGCTGC CTGAGCTGGC CAAGGTCAGC GAGTTCATCC ACTTCGCCTG CACCAGCGAG
GACATCAACA ACCTGTCCCA CGCCCTGATG CTGCGCGCTG GCCGTGACGA AGTGCTGTTG
CCGCTGATGC GCCAGGTCGC CGACGCCATC CGCGCCCTGG CCCACGCCCA CGCCGAAGTG
CCAATGCTGT CGCGTACCCA TGGTCAGCCG GCTTCGCCGA CCACCCTGGG TAAAGAACTG
GCCAACGTCG TGTATCGCCT GGAGCGCCAG ATCGCCCAGG TTGCCGCCGT GCCACTGCTG
GGCAAGATCA ACGGCGCCGT GGGCAACTAC AACGCCCACC TGTCGGCCTA CTCGCAGATC
GACTGGGAAG AGAACGCCCG CGCCTTCATC GAAGACGAAC TGGGCCTGCA GTTCAACCCG
TACACCACCC AGATCGAGCC GCACGACTAC ATCGCCGAGC TGTTCGACGC CATCGCCCGC
TTCAACACCA TCCTGATCGA CTTCGACCGT GATGTGTGGG GCTACATTTC GCTGGGTTAC
TTCAAGCAGA AGACCGTTGC CGGCGAAATC GGTTCGTCGA CCATGCCGCA CAAGGTCAAC
CCGATCGACT TCGAAAACTC CGAAGGCAAC CTGGGTATCG CCAACGCGCT GTTCCAGCAC
CTGGCCAGCA AGCTGCCGAT CTCGCGCTGG CAGCGTGACC TGACCGACTC CACCGTGCTG
CGCAACCTGG GCGTGGGCTT TGCCCACAGC GTGATCGCCT TCGAGGCCAG CCTGAAAGGC
ATCGGCAAGC TGGAAGTCAA CGAAGCTCGC ATCGCCGCCG ACCTGGACGC TTGCTGGGAA
GTGCTGGCCG AGCCGATCCA GACCGTGATG CGCCGCTTCA ACATCGAAAA CCCCTACGAG
AAGCTCAAAG AGCTGACCCG TGGCAAGGGC ATCACCCCAG AAGCGCTGCT GACCTTCATC
GACGGCCTGG ACATGCCAGC CGAAGCCAAG GCCGAGCTCA AGCAGCTGAC CCCCGCTACC
TACATCGGTA ACGCGGCGGC CCAGGCCAAA CGCATCTAA
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| Protein sequence | MYDMRPSKSL TVREHPMQLS SLTAVSPVDG RYAGKTQALR PIFSEFGLIR FRALVEVRWL
QRLAAHPQIG EVPAFSAEAN ALLDSLANDF KLEHAERVKE IERTTNHDVK AIEYLLKEQA
AKLPELAKVS EFIHFACTSE DINNLSHALM LRAGRDEVLL PLMRQVADAI RALAHAHAEV
PMLSRTHGQP ASPTTLGKEL ANVVYRLERQ IAQVAAVPLL GKINGAVGNY NAHLSAYSQI
DWEENARAFI EDELGLQFNP YTTQIEPHDY IAELFDAIAR FNTILIDFDR DVWGYISLGY
FKQKTVAGEI GSSTMPHKVN PIDFENSEGN LGIANALFQH LASKLPISRW QRDLTDSTVL
RNLGVGFAHS VIAFEASLKG IGKLEVNEAR IAADLDACWE VLAEPIQTVM RRFNIENPYE
KLKELTRGKG ITPEALLTFI DGLDMPAEAK AELKQLTPAT YIGNAAAQAK RI
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