| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1814 |
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| Symbol | |
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| ID | 5193946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2082725 |
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| End bp | 2084686 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640586282 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_001267151 |
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| Protein GI | 148547049 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.230615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.182925 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTGT TCCTCTGTGA AAAACCCTCC CAGGCAAAAG ACATTGCCAA AGTGCTCGGC
GCCAACCGCA AAGGCGACGG CTGCTGGCAA GGCACCGATA TCTGCGTCAC CTGGTGCATT
GGCCACCTGC TGGAAACCGC CCCGCCCGAC AGCTATGACG AACGTTACAA GCGCTGGAAC
CTGGCCGACC TGCCGATCAT TCCAGACAAG TGGAAGATGC TGGTAAAGCC CAAGACCGCC
AGCCAGTTCA AGGCGGTCAA ACGTCTGCTC GGTGAAGCGC GGGAGCTGGT GATTGCCACC
GACGCCGACC GCGAAGGCGA AATGATTGCC CGCGAACTGG TCGAGCACTG CCGCTACCGA
GGCCCGGTGC AGCGCCTGTG GCTGTCGGCG CTGGATGACG CCTCCATCCG CAAGGCCCTG
GCGCGCCTGC TGCCAGGCCA CGAGACGTTC AACCTGTACC ACTCGGCGCT GGGCCGCTCG
CGCGCCGACT GGCTGATCGG CATGAACATG AGCCGGCTGT TCACCTTGCT GGGCCGCCAA
TCCGGCTACC AGGGTGTGCT GCCGGTAGGC CGCGTGCAAA CGCCGACCTT GCGCCTGGTG
GTCGACCGCG ACCGCAGCAT CGCCAACTTC GTGCCAGTGC CGTTCTGGGC CATCGACGTA
CAGCTGGAAC ACGCCGGCCA ACGCTTCAAT GCCCAATGGC GCGCCCCCGA AGACGTCTGC
GATGACCAAG GCCGCTGCCT GAAGCAAGAC CTGGCACAGC GGGCCGCCAC CGACATCGGC
CATGCCGGCA CTGCCCGAGC GGTAAAGGTA GCGACCGAGC GTGTGCGCGA AGCAGCACCG
CTGCCCTTCG ACCTTGGCAC CCTGCAGGAG CTGTGCTCGA AAAAGTTCGG CCTCGGCGCC
CAGGAAACCC TCGACATTGC CCAGGCACTG TACGAAACAC ACAAGCTGAT CACCTACCCG
CGCAGCGATT GCGGCTATTT GCCACAAAGC CAGCACGCCG AGGCACCCGC CATCCTCGCC
GCCCTGCAAC GGGCCGATGC CAGCCTGGCA CCGCTGCAGC CCTACCTGGA GCCGCAACGC
CGCTCGCGGG CGTGGAACGA CGCCAAAGTC AGCGCTCACC ATGGCATCAT CCCCACCGCC
GCCGCCAGTG ACCCCTCGCG CCTGCCGGCC AAGCACAAGG CCGTGTATAC CCTGATCCGC
GCCCGCTATC TGGCGCAGTT CCTGCCCAAC CATGAGTACG ACCGCACCCA GGCCGACTTC
GACTGCGCCG GTCATGCGCT GCGTGCTGTG GGCAAGCAGA TCGTCGAGCC GGGCTGGCGC
CGCGCCTTGC CCGAGGCGCT CACCCCGGCC AAAGGCCGCG AGGCACCACC GGCCCAGGTG
CTGCCGGCGC TTCGCGAAGG CCAGGACTGC AACGTAAACG GCCTGCAACT GAAAGACCTG
TGGACCCAGC CACCCAAACC GTTTACCGAA GGCGACCTGA TCAAGGCGAT GAAAAACGTG
GCCAAGCTGG TGGATGACCC TCGGCTGAAG CAGAAACTCA AGGAAACCAC CGGCATCGGC
ACCGAGGCCA CCCGCGCCAG CATTATCCAG GGTCTGCTCG ACCGCGGTTA CCTGGTAAAG
AACGGCAAGG CGCTGTCGGC CACACCTGCG GCCTTCAGCC TGATCGACGC CGTTCCCCGC
GCCATTGCCG ATCCCGGCAC CACGGCGATC TGGGAGCAGG CGCTGGACAT GGTGCAAAGC
GGCGAGATGA CCCTGGAAGA GTTCGTTGCC CGGCAGTCGG CGTGGATGGG CAAGCTGGTC
GAGCGTTGCA GCGGCATGCG CATGACCATC AGCGGGCCAG CGGCCGGGGC GGCCCCGCCC
TGGAAGAAGA AACGTCGCGG TGGAGGTGGC AAAAGCAAAG CGGCCGGAAA CAAGGCAACT
CCGAGCAAGC CACGGCAGCC GCGGAAAAAG GCAACGTCCT GA
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| Protein sequence | MRLFLCEKPS QAKDIAKVLG ANRKGDGCWQ GTDICVTWCI GHLLETAPPD SYDERYKRWN
LADLPIIPDK WKMLVKPKTA SQFKAVKRLL GEARELVIAT DADREGEMIA RELVEHCRYR
GPVQRLWLSA LDDASIRKAL ARLLPGHETF NLYHSALGRS RADWLIGMNM SRLFTLLGRQ
SGYQGVLPVG RVQTPTLRLV VDRDRSIANF VPVPFWAIDV QLEHAGQRFN AQWRAPEDVC
DDQGRCLKQD LAQRAATDIG HAGTARAVKV ATERVREAAP LPFDLGTLQE LCSKKFGLGA
QETLDIAQAL YETHKLITYP RSDCGYLPQS QHAEAPAILA ALQRADASLA PLQPYLEPQR
RSRAWNDAKV SAHHGIIPTA AASDPSRLPA KHKAVYTLIR ARYLAQFLPN HEYDRTQADF
DCAGHALRAV GKQIVEPGWR RALPEALTPA KGREAPPAQV LPALREGQDC NVNGLQLKDL
WTQPPKPFTE GDLIKAMKNV AKLVDDPRLK QKLKETTGIG TEATRASIIQ GLLDRGYLVK
NGKALSATPA AFSLIDAVPR AIADPGTTAI WEQALDMVQS GEMTLEEFVA RQSAWMGKLV
ERCSGMRMTI SGPAAGAAPP WKKKRRGGGG KSKAAGNKAT PSKPRQPRKK ATS
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