Gene Pput_1811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1811 
Symbol 
ID5193943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2079086 
End bp2079997 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content47% 
IMG OID640586279 
Producthypothetical protein 
Protein accessionYP_001267148 
Protein GI148547046 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0954241 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.759797 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAAA ACAGGAAGCA ATGCTTATTT TACAAAAATG ACCACCTGTC TTCGAAAATT 
GACAGCGGAC GTTCCGTGAC AGTGTTTTCC ATCTCAAACA TTCCTCTGGC GGAACACTCA
ACCGAAACAC TATTACTGGC AACAGACTCA CGTAACTCCA TAGCAAGGCG CTCTTATCGC
AGCGGCACTT GCAACCTGAC CTACACCGCT TACGGGTACA GCGTTACAGC TCATATGATG
GGATTCACCG GACAACGCTT CGATGACGTC ACAAACTGCT ACCTCCTTGG TAACGGTTAT
CGCGCCTTTA GTCCGAGATT AGCTCGATTT TATTCAGCAG ACAGCCTCAG CCCGTTTACA
AAACACACAC ATAACGCCTA TGCCTATTGC CTGGGTGACC CAGTAAATTA CCACGACCCT
TCGGGACATA TGTTACGCCG CCTCAATACA ATGTGGAATA GCGTAAAGAA TAAGTTCGTG
AAGCCCAGGA TTCATTACAT CAACAAAGCA AGGGAAGCAA TCACGAATTT CCCCAACCTC
GAACAATACT CCACTATCGT TGACAGTCCA AACGTAACCC AAGACACCCT CCAGATGATC
TACAAGCTTC CGAAGATGGA CGCCATGCTT GCTGAGCTTA GAGACACAGC AGTCCTTAAC
TGGCGTTTCA AGAAAGGCAA TATTGAAGGC CCCATCATTC AAGACTTTGA CTATCTCAAG
CATTTGGACA TAGACGGACA ACTTGCCTAC ATAGGACTAG TGGAAAAGAG CCATAAGTAT
AGAGCCCAGT TGAACAACTT AGCATTCGCG TCCCAGCAAA CCGCCAAAAG GCATTCGAGC
ATTCAATTAC CCGCTACGTC ACCTGATCTA TCACATCCAG CCACTCTCAG ATCAGTGAGG
CGAGGGTCAT AA
 
Protein sequence
MSQNRKQCLF YKNDHLSSKI DSGRSVTVFS ISNIPLAEHS TETLLLATDS RNSIARRSYR 
SGTCNLTYTA YGYSVTAHMM GFTGQRFDDV TNCYLLGNGY RAFSPRLARF YSADSLSPFT
KHTHNAYAYC LGDPVNYHDP SGHMLRRLNT MWNSVKNKFV KPRIHYINKA REAITNFPNL
EQYSTIVDSP NVTQDTLQMI YKLPKMDAML AELRDTAVLN WRFKKGNIEG PIIQDFDYLK
HLDIDGQLAY IGLVEKSHKY RAQLNNLAFA SQQTAKRHSS IQLPATSPDL SHPATLRSVR
RGS