| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1797 |
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| Symbol | |
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| ID | 5191778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2062573 |
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| End bp | 2064369 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640586265 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_001267134 |
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| Protein GI | 148547032 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.572584 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.731275 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCCC ACATCGAAGA CTACGCCCTG CTGGGCAACT GCCGCAGTGC GGCGCTGGTC
AGTCGCGATG GCGCGCTGGA CTGGCTGTGC CTGCCACGCT TCGACGCCCC CGCCGTGTTC
GCGGCCCTGC TGGGCAACGA AGAAAATGGC CGCTGGCGCC TGGCCCCTTG CGACCCGGTA
ACGCACAGCA GCCGCCAATA CCTGGGCGAT ACCCTGGTGC TGGAAACCAC CTGGGTCACC
GCCAGCGGTC GTGCCCGGGT GCTCGACTTC ATGCCCTTGG GCGAAGTCAA TTCGGTGGTG
CGCATCGTCG AAGGCTTGTC TGGCGAAACC CATTTCGAAA TGGACCTGGT CATGCGCTTC
GACTACGGCC GCAGCGTGCC CTGGGTGGAA CGGCTCGACC CACTGACCCT CAGCGCCGTC
GCCGGCCCTG ACCGTTTGAT CCTGTGCAGC ACCGTGCCCC CGCAAGCCCG CGACCACCAT
ACCGGCTGCC GCTTTCGCGT CAGCACGGGC CAGCGCCAGG TCTTCAGCCT GCGTCACCAG
CCCTCGCACT TGTCGGTGCA GCCTGACTGC AACATCGACC ACGCCCTGGC AAACACCTGT
GAGCAATGGC AGGCCTTCGC CGACCGCTGC CCGCAGGTAG GGCCATATAC CGCCCTGGTG
CGTCGTTCGC TGCTCACCCT CAAGGCCATG ACCTACGCCC CCACCGGCGG TATTGTCGCT
GCCGTCACCA CTTCGTTGCC TGAGCGTGTG GGGGGCGAGC GCAATTGGGA CTACCGCTTC
TGTTGGCTGC GCGACGCGAC CATGACCCTG CTGGCCTTCA TGAACCTTGG CTACTTCGAC
GAGGCCCAGG CCTGGCGCGA GTGGCTGCTG CGCTCGGTGG CCGGCAACCC CGAGCAGATG
CAGATCATGT ATGGCCTGGC TGGCGAGCGT GACCTGCAGG AGTACACCTT GCCGTGGTTG
GCCGGTTATG AACATTCACA GCCGGTGCGG GTGGGCAACG CCGCCTCGGC GCAGACACAA
CTGGACATCT ATGGCGAACT GGCCGATGCG ATGACTCAGG CGATCAGGGG CGGGTTGCCC
CGTCACCCGC GCGGCGCCGC CATTTCGCGC CTGATATTGC CTTATGTCGA ACGCATCTGG
CGCGAGCCGG ACGAGGGCAT CTGGGAAGTG CGTGGCGGCC GGCAGCAGTT CGTGCACTCC
AAGGTAATGG CCTGGGTCGC CTTCGACCGC GCCGCAGGGC TGGCCGACAC CACGGAAGAA
GGCCGCGAGC GCGGGCAGCA TTATCGCCAG GTGGCTGACG AGATTCACCG CGACGTGTGC
GAGCACGGCC TGGACCCCAG CGGCCGGTTC TTCGTCCAGG CCTATGGTTC GACCGAAATG
GACGCCAGCC TGTTGCAGAT CGCCCTGACC GGCTTCCTGC CGGCGGATGA CCCACGCTTC
ATGCGCACCC TGGAACAGAT CGAACAGCGT CTGATGAAGA ACGGCCTGCT GCTGCGCTAT
GACAGTGACA GCTGCAGCGA CGGCCTGACG CCGGGAGAGG GCACCTTCCT GGTGTGTTCG
TTCTGGCTGG CTGACGTTTA TGTATTGCTG GGGCGCCAGG GCAAAGCCGA AGCGCTGTAC
CAACACCTGA CCGGCCTGTG CAACGACCTC GGCCTGCTGG CCGAACAGTA CGACTCGGCC
GGCCAGCGCA TGCTCGGCAA CTTCCCCCAG GCCTTCAGCC AGATAGGCAT CATCAACACC
GCGCTGAATC TGCACCGCGC ACAGTGCCCG GCGCGCGACC GGGCGCGTTG TGGGTAG
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| Protein sequence | MPAHIEDYAL LGNCRSAALV SRDGALDWLC LPRFDAPAVF AALLGNEENG RWRLAPCDPV
THSSRQYLGD TLVLETTWVT ASGRARVLDF MPLGEVNSVV RIVEGLSGET HFEMDLVMRF
DYGRSVPWVE RLDPLTLSAV AGPDRLILCS TVPPQARDHH TGCRFRVSTG QRQVFSLRHQ
PSHLSVQPDC NIDHALANTC EQWQAFADRC PQVGPYTALV RRSLLTLKAM TYAPTGGIVA
AVTTSLPERV GGERNWDYRF CWLRDATMTL LAFMNLGYFD EAQAWREWLL RSVAGNPEQM
QIMYGLAGER DLQEYTLPWL AGYEHSQPVR VGNAASAQTQ LDIYGELADA MTQAIRGGLP
RHPRGAAISR LILPYVERIW REPDEGIWEV RGGRQQFVHS KVMAWVAFDR AAGLADTTEE
GRERGQHYRQ VADEIHRDVC EHGLDPSGRF FVQAYGSTEM DASLLQIALT GFLPADDPRF
MRTLEQIEQR LMKNGLLLRY DSDSCSDGLT PGEGTFLVCS FWLADVYVLL GRQGKAEALY
QHLTGLCNDL GLLAEQYDSA GQRMLGNFPQ AFSQIGIINT ALNLHRAQCP ARDRARCG
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