| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1793 |
|---|
| Symbol | glgA |
|---|
| ID | 5193906 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 2057394 |
|---|
| End bp | 2058953 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640586261 |
|---|
| Product | glycogen synthase |
|---|
| Protein accession | YP_001267130 |
|---|
| Protein GI | 148547028 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0297] Glycogen synthase |
|---|
| TIGRFAM ID | [TIGR02095] glycogen/starch synthases, ADP-glucose type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.834326 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAGTG CCGCTGTCGA GCCTCACGTA GACGCTTTCA AACCGGATAA CCGCGAGCCG
CTCACCCCGG ATTTCGCCAC GACAGGCAAG GCACCCGGCG CCCAGCGCCA GCAAAACCCG
AACATGCGCA AGATTCTGTT CGTGACCTCG GAAATCGCTG ATCTGGTGAA AACCGGTGGC
CTGGGTGATG TGTCCGCTGC CCTGCCCCGT GCCCTGGCGC ACCTGCACGA TGTGCGGGTA
CTTATCCCCG GCTACCGCCA GGTGATGGAA AGCGACAACC CTATACATAT CGTGGGTGAA
CTGGGCGGCC ATGCGGCCCT GCCGCCCTGC AAGATCGGGC GCATGGACAT GGCCGACGGC
CTGGTCATCT ATGTGTTGAT CTGCCCCGAA CTGTACCAGC GCGACGGCAC ACCCTATGGT
GCCAACAATG GCCGCGACTG GCCCGACAAC CACATCCGCT TCGCCCGCCT GGGCCTGGCT
GCCGCCGAAA TCGCTGCCGG CGAAGGCAAG ATCCACTGGA CGCCGGAAGT GGTGCACGCG
CATGACTGGC CCGCCGGCCT GGCCCCCGCC TACATGCACT GGCGCGGCCT GAATACGCCC
ACGCTGTTCA CCATCCACAA CCTGGCGTAC CAAGGTGTGT ACAGCCGCGG TTGCAGCCCG
GAGCTGGCGA TACCCGAACA TGCCATGCAG CAAGAAGGCA TGGAGTTCTA CGGCAAGCTG
TCGTTCCTCA AGGCCGGCCT GGCCTACTCC AGCCACATCA CCACAGTCAG CGCCACCTAT
GCCCGGGAAA TCACCACCCC GGAATTCGGC TGCGGCCTGG ACGGTTTCCT CGCCAGCAAG
GCCCAGCAAG GCCTGCTCGG TGGCATCCCC AACGGCATCG ACGAAAGCTG GGACTCGGCC
ACCGACAAGC ACCTGCAACA CAACTTCAGC ATCAATGACT GGGAGGGCAA AGCGCGTAAC
ACCCAGGAGG TGCGCGAGCT GTTCGGCCTG GACGATTCCG AAGGCCCACT ATTCGCCGTG
GTGTCGCGGC TGGTCTATCA AAAGGGCCTG GACCTGACCC TGGGCGTGGC CGACTACATC
GTCGAGCAAG GCGGGCAGAT TGCGATCATC GGCCGCGGCG AGCCGGAAGA AGAACAGGCC
ATGCGCGAGC TGGCACTGCG TCACCCGGGC CGCATCGGCG TGCGTATTGG TTTCAATGAA
ACCGATGCCC GGCGCATGTT CGCCGGCAGC GATTTCCTGC TGATGCCGTC TCGGTATGAG
CCGTGCGGCC TTAGCCAGAT GTACGCGCAA CGCTTCGGCT CGCTGCCGGT AGCACGCAAT
ACCGGTGGCC TGGCCGACAC CATCGAGTGC GGCGTGACGG GCTTCCTGTT CAACGAGTCC
ACCGTCGAGA GCTACCGCGA GGCACTCAGC CGCGCCTTCT ATGTTTACGG CAAGAAGGAC
CTGCTGAACG CCATGCGCTG CCTGTCGATG ACCCAGCCGT TCAACTGGTG CCAGGCGGTT
GAACCCTATG CCCGCCTGTA CGAGGACCTG GTCAAGCAGA CACAACTGAG CCACTACTGA
|
|---|
| Protein sequence | MISAAVEPHV DAFKPDNREP LTPDFATTGK APGAQRQQNP NMRKILFVTS EIADLVKTGG
LGDVSAALPR ALAHLHDVRV LIPGYRQVME SDNPIHIVGE LGGHAALPPC KIGRMDMADG
LVIYVLICPE LYQRDGTPYG ANNGRDWPDN HIRFARLGLA AAEIAAGEGK IHWTPEVVHA
HDWPAGLAPA YMHWRGLNTP TLFTIHNLAY QGVYSRGCSP ELAIPEHAMQ QEGMEFYGKL
SFLKAGLAYS SHITTVSATY AREITTPEFG CGLDGFLASK AQQGLLGGIP NGIDESWDSA
TDKHLQHNFS INDWEGKARN TQEVRELFGL DDSEGPLFAV VSRLVYQKGL DLTLGVADYI
VEQGGQIAII GRGEPEEEQA MRELALRHPG RIGVRIGFNE TDARRMFAGS DFLLMPSRYE
PCGLSQMYAQ RFGSLPVARN TGGLADTIEC GVTGFLFNES TVESYREALS RAFYVYGKKD
LLNAMRCLSM TQPFNWCQAV EPYARLYEDL VKQTQLSHY
|
|---|
| |