| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1792 |
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| Symbol | |
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| ID | 5193905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2055637 |
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| End bp | 2057379 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640586260 |
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| Product | malto-oligosyltrehalose trehalohydrolase |
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| Protein accession | YP_001267129 |
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| Protein GI | 148547027 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR02402] malto-oligosyltrehalose trehalohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.932026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAGAC ATGGCGCACA CTTGCTGGAC GCCACGTCGG CGCGCTTCGC CCTCTGGGCG
CCGGATGCGC GCAGCGTGAG CGTGGAACTG GAGCGGCAGC CGGCCATCGA ACTGCTGCCG
GATGATGAGG GTTGGTACAG CGGCGTGGCG CCATGCCAGG CCGGTGACCG TTACCACTAC
CGTATCGACG GTGAGCTGCA GGTGGCCGAC CCGGCCTCGC GCTACCAGCC CGACGGCGTA
CACGGGCCGA GCCAGGTAGT GGATGTGACC GGTTATGCCT GGCAACACCC GTGGCTGGGC
CGGCCTTGGC ATGAGGCCGT GATCCAGGAG GTGCATGTCG GCCTGCTCGG GGGGTACGCC
GGGGTTGCCC GGCACCTGCA GCGCCTGGCC GAACTGGGCA TCAGCGCGAT CGAGCTGATG
CCGCTGGGGC AGTTCCCCGG CGAACGCAAC TGGGGCTACG ACGGCGTACT CCCTTACGCC
CCACAGAACA CCTACGGCAG CCCCGAGCAG CTGTGCGCAC TGGTCGACCA GGCCCACGGC
CACGGGCTGA TGGTGCTGGT CGATGTGGTG TACAACCACT TCGGACCTGA CGGCAATTAC
CTGCACCAGT ACGCCAGCCC CTTCTTCCGT GAAGACCGGC AGACACCCTG GGGCGCGGCC
ATCGACTTTC GCCGTCCGCA GGTGCGCGAG TACTTTATCC AGAATGCCCT GATGTGGCTG
TGCGACTACC GCTGCGACGG CCTGCGCCTG GATGCCGTGC ATGCCATCGA CCAGCCCGAC
TTCCTGATCG AACTGGCCCA ACGGGTACGC GCCGCCGTAG AACCGGGCCG GCACGTGTGG
CTGGTGCTGG AGAACGAGCA CAACCAGGCA GGCCTGCTGG AACAGGGTTA CGATGCCCAG
TGGAACGACG ACGGCCACAA TGCCCTGCAC GTGCTGCTGA CCGGTGAAAC CGAAGGTTAC
TACGCCGACT ACCAGCATCG CCCTATCGAC CAACTGGCCC GGTGCCTTGG CGAAGGTTTC
GTGTTCCAGG GCCAGGCCAA CCGGCATGGC AAACCACGCG GCGAACCCAG CGGGCATTTG
CCGCCCAGCG CCTTCGTGCT GTTCCTGCAG AACCACGACC AGGTCGGCAA CCGCGCGCTG
GGTGAGCGCC TGACCCGCCT ATGCCCCGCG CCAGCTTTGC GTGCAGCCAC CGGCCTGTTG
CTGCTGGCCC CCATGATTCC GCTGCTGTTC ATGGGCGACG AAGCCGGCAG CTGCCAGCCG
TTCCTGTTCT TTACCGACTT CCATGACGCG TTGGCCGACG CGGTCCGCGA AGGCCGTCGT
GGCGAGTTCG CCCATTTCAC CGCGTTCGCC GACCCCACGC AGCGTGAGCA CATTCCCGAC
CCCAACGCCG AACAGACGTT CGCCTCCTCA CGCCCGCAAA ACAAGGCGGT GATCGCCGGC
TGGCACGGCC TTTACCAGCA ACTGCTCGAC CTGCGCCGCC GCCACGTCAT CCCGCACTTG
CCCGGCAGCC GTGCGCTGGG CGCCGAGGTG CACGCAGACA AAGCGCTGAC CGCGCGCTGG
CGGCTGGGCA ATGGCAACAC ATTGCGCATC GACCTGAACC TGGCCGACAC CCCGCAGGCA
GTCGAACTGC CCGCGCCAAC CACACGGCTG TTCGACAGCA GCGACACCCG CCACCCGGAT
ACCCACCTGG CTGCCTACAG CTGCGTGGTC AGCCTGCTTC CCCCTGCCCA GGAGCGCCCA
TGA
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| Protein sequence | MHRHGAHLLD ATSARFALWA PDARSVSVEL ERQPAIELLP DDEGWYSGVA PCQAGDRYHY
RIDGELQVAD PASRYQPDGV HGPSQVVDVT GYAWQHPWLG RPWHEAVIQE VHVGLLGGYA
GVARHLQRLA ELGISAIELM PLGQFPGERN WGYDGVLPYA PQNTYGSPEQ LCALVDQAHG
HGLMVLVDVV YNHFGPDGNY LHQYASPFFR EDRQTPWGAA IDFRRPQVRE YFIQNALMWL
CDYRCDGLRL DAVHAIDQPD FLIELAQRVR AAVEPGRHVW LVLENEHNQA GLLEQGYDAQ
WNDDGHNALH VLLTGETEGY YADYQHRPID QLARCLGEGF VFQGQANRHG KPRGEPSGHL
PPSAFVLFLQ NHDQVGNRAL GERLTRLCPA PALRAATGLL LLAPMIPLLF MGDEAGSCQP
FLFFTDFHDA LADAVREGRR GEFAHFTAFA DPTQREHIPD PNAEQTFASS RPQNKAVIAG
WHGLYQQLLD LRRRHVIPHL PGSRALGAEV HADKALTARW RLGNGNTLRI DLNLADTPQA
VELPAPTTRL FDSSDTRHPD THLAAYSCVV SLLPPAQERP
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