| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1788 |
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| Symbol | |
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| ID | 5191700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2048231 |
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| End bp | 2050384 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640586256 |
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| Product | glycogen debranching enzyme GlgX |
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| Protein accession | YP_001267125 |
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| Protein GI | 148547023 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCCCC GCACCCCAAA GAAAACCCGC TCGGTCGCAC CATCGCGCAT CCGCGAAGGC
ATGCCCTTCC CCCTCGGCGC CACCTGGGAT GGCCTTGGGG TCAACTTCGC CCTCTTCTCG
GCCAACGCCA CCAAGGTCGA GCTGTGCCTG TTCGACTCCA CGGGCGAGCA GGAAATCGAG
CGCATAGAGC TGCCCGAATA CACCGATGAG ATCTACCATG GCTACCTCCC CGACGCTCAC
CCCGGCCTGG TCTATGGCTA CCGGGTGTAC GGCCCCTACG AGCCGGAAAA CGGCCACCGC
TTCAACCCCA ACAAACTGCT GATCGACCCG TATGCCAAGC AACTGGTCGG CAGCCTGAAA
TGGTCCGAGG CACTGTTCGG CTACACCATC GGCCACCCGG ACGGTGACCT GTCGTTCGAC
GAGCGCGACA GCGCGCCTTT CGTGCCCAAA TGCAAGGTCA TCGACCCGGC GTTCACCTGG
GGCCGCGACC AGCGCGTGCA GATCCCATGG GAGCGCACGA TCATTTATGA AGCGCATGCC
CGCGGCATCA GCATGCGCCA CCCGGCTGTG CCTGAAGAAC TGCGCGGCAC CTTCGCCGGC
CTGGCCAACG ACGAGTTGCT CAAACACATC AAGGACCTTG GCGTGTCGAG CATCGAGCTG
CTGCCGATTC ACGCCTTCGT CAACGACCAG CATCTGCTGG ACAAGGGCCT GAACAACTAC
TGGGGCTACA ACAGCATCGC CTTTTTCGCT CCACACCCGC GCTACCTGGC CAGCGGCAAG
ATCGCCGAGT TCAAGGAGAT GGTCGCGCAC CTGCACGACG CCGGGCTCGA AGTGATCCTG
GACGTGGTCT ACAACCACAC CGCCGAAGGC AACGAGCGCG GCCCGACCCT GTCGATGCGC
GGCATCGACA ACGCCTCGTA TTACCGCCTG ATGCCGGACG ACAAGCGCTA CTACATCAAC
GACTCCGGCA CCGGCAACAC CCTGGACCTG AGCCACCCCT GCGTGCTGCA GTTGGTCACC
GACTCGCTTC GCTACTGGGC CGGCGAAATG CACGTGGATG GCTTTCGCTT TGACCTGGCG
ACCATCCTTG GCCGTTACCA CGATGGCTAC AGCGAGCGTC ATGGCTTCCT GGTCGCCTGC
CGCCAGGACC CGATGCTGAG CCAGGTCAAG CTGATTGCCG AACCATGGGA CTGCGGCCCC
GGCGGCTACC AGGTGGGCAA CTTCGCCCCG GGCTGGGCGG AATGGAACGA CCGCTTCCGC
GATACCGCAC GCGCCTTCTG GAAAGGCGAC GAAGGCCAGT TGGCCGATTT TGCCGCCCGC
TTGACCGCCT CGGGCGACAT GTTCAACAAC CGCGGGCGCC GGCCCTATTC CTCGGTCAAC
TTCATCACCG CCCACGATGG TTTCACCCTG CGCGACCTGG TGTCCTACAA CCACAAGCAC
AACGAAGACA ATGACGAAAA CAACCAGGAC GGCACCGACA ACAACCTGTC CTGGAACTGC
GGCGTCGAAG GGCCGACCGA CGACCCGGGG ATCAATGCCC TGCGCATGCG CCAGATGCGC
AACTACTTCG CCACCCTGCT GCTGGCCCAG GGCACGCCAA TGATCGTGGC CGGCGACGAG
TTCAGCCGCA CTCAGCACGG CAACAACAAT GCCTACTGCC AGGACAGCGA GATCGGCTGG
GTGAACTGGG ACCTGGACCA GGAAGGCCAG GAGCTGCTGG CCTTCGTCAA ACGCCTGACC
CGCCTGCGCC TGGCCTACCC GGTGCTGCGC CGGTCACGCT TCCTGGTGGG GGACTACAAT
GAGGCAATTG GGGTCAAGGA CGTGACCTGG CTGGCACCCG ATGGCAACGA GATGAGTGTT
GAGCAATGGG AAGATCCACA CGGGCGTTGC CTGGGCATGC TGATAGATGG TCGGGCACAG
GTCAGCGGTA TCGCCCGGCC AGGTGCCGAG GCCACCGTGC TGCTGATCGT CAATGCCCAC
CATGACGTGG TGCCATTCAA GCTGCCGGCC GTGCCCGAAG GCGATTACTG GAGCTGCCTG
GTCGATACCG ACCGGCCGGA GTTGCGCAAG GGGCAGCACC TGCAATTCGA CAGTACCTTC
GAGGTGAAGG GCCGGTCGAT GCTGCTGATG GTGTTGCAGC GCGACGAGGA GTGA
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| Protein sequence | MSPRTPKKTR SVAPSRIREG MPFPLGATWD GLGVNFALFS ANATKVELCL FDSTGEQEIE
RIELPEYTDE IYHGYLPDAH PGLVYGYRVY GPYEPENGHR FNPNKLLIDP YAKQLVGSLK
WSEALFGYTI GHPDGDLSFD ERDSAPFVPK CKVIDPAFTW GRDQRVQIPW ERTIIYEAHA
RGISMRHPAV PEELRGTFAG LANDELLKHI KDLGVSSIEL LPIHAFVNDQ HLLDKGLNNY
WGYNSIAFFA PHPRYLASGK IAEFKEMVAH LHDAGLEVIL DVVYNHTAEG NERGPTLSMR
GIDNASYYRL MPDDKRYYIN DSGTGNTLDL SHPCVLQLVT DSLRYWAGEM HVDGFRFDLA
TILGRYHDGY SERHGFLVAC RQDPMLSQVK LIAEPWDCGP GGYQVGNFAP GWAEWNDRFR
DTARAFWKGD EGQLADFAAR LTASGDMFNN RGRRPYSSVN FITAHDGFTL RDLVSYNHKH
NEDNDENNQD GTDNNLSWNC GVEGPTDDPG INALRMRQMR NYFATLLLAQ GTPMIVAGDE
FSRTQHGNNN AYCQDSEIGW VNWDLDQEGQ ELLAFVKRLT RLRLAYPVLR RSRFLVGDYN
EAIGVKDVTW LAPDGNEMSV EQWEDPHGRC LGMLIDGRAQ VSGIARPGAE ATVLLIVNAH
HDVVPFKLPA VPEGDYWSCL VDTDRPELRK GQHLQFDSTF EVKGRSMLLM VLQRDEE
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