| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1785 |
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| Symbol | |
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| ID | 5192543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2043496 |
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| End bp | 2045706 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640586253 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_001267122 |
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| Protein GI | 148547020 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.146996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.282857 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTTA CAACGCGTGA AAACGGTGGC CTTCGGCAAC GGGACCTCGA CGCCCTGGCC
CGCGCCGAAC ACGCCGATCC TTTTGCGGTA CTCGGCCCCC ACGGCGACGG CGCAGGCGGG
CAGGTGGTCC GCGCCTTTCT GCCCAATGCC CTGAAAGTGC GCGTTCAGGC CCGGGATGAC
GGGCGGGTGC TTGCCGAAAT GGAGCAGGGC AGCCTGCCTG GGTTGTTCAG CGCGCACCTT
GATGAGGCAC AGCCCTACCA GTTTCATATC GTCTGGGCCG GTGGCGAACA GGTTACCGAA
GACCCCTACA GCTTCGGCCC GCAACTGGGT GACATGGACC TTCACTTGTT CGCGGAAGGC
AATCACCGCG ATCTGTCCGG GCGCTTCGGT GCACAGCCGA CTCAGGTCGA TGGCATCGAC
GGCGTGTGTT TCTCGGTCTG GGCGCCGAAT GCCCGGCGGG TGTCGGTGGT GGGTGATTTC
AACAACTGGG ATGGCCGCCG CCACCCCATG CGCCTGCGGC ACGGCGCGGG GGTGTGGGAG
CTGTTCATTC CGCGCCTGGG CGTGGGCGAA ACCTACAAGT TCGAAGTGCT TGGCAAGGAC
GGCATACTGC CGCTGAAGGC CGATCCGCTG GCCCGTGCCA CCGAGCTGCC GCCGAGCACG
GCGTCCAAGG TAGCCGGTGA ACTCAGCCAC GCCTGGCAGG ACCATGACTG GATGGCGCAA
CGCGCCCAGC GCCATGCCTA CAACGCGCCG TTGTCGATTT ATGAGCTGCA CCCAGGGTCA
TGGCGCTGCG AGCTGGACGA AGCGGGCGAA GTCGGGCGTT TCTACAACTG GCGCGAACTG
GCCGAACGGC TGGTGCCCTA TGTGCAGGAA CTGGGCTTTA CCCACATCGA ATTGCTGCCA
ATCATGGAAC ACCCGTTCGG CGGCTCCTGG GGCTATCAAC CATTGTCGAT GTTCGCGCCC
ACCTCGCGCT ACGGCAGTGC CGAGGATTTC GCCGCGTTCA TCGACGCCTG CCACCAGGGA
GGCATCGGTG TACTGCTGGA CTGGGTGCCG GCGCATTTTC CCACCGACGA ACATGGCCTG
GCGCGCTTCG ATGGCACTGC GCTGTACGAA TACGACAACC CCCTGGAGGG CTACCACCAG
GACTGGAACA CGCTGATCTA CAACCTCGGG CGCAATGAAG TGCGCGGCTT CATGATGGCT
TCGGCGCTGC ACTGGTTGAA GCATTTCCAC ATCGACGGCC TGCGCGTCGA TGCGGTGGCC
TCGATGCTGT ACCGCGACTA CTCGCGCAAG GCCGGCGAAT GGGTACCCAA CCGCCACGGC
GGGCGTGAGA ACCTGGAAGC CATCGACTTC ATCCGCCACC TCAACGGCGT GGCTGCCCAC
GAGGCCCCGG GTGCGCTGAT CATCGCCGAG GAGTCCACCG CCTGGCCCGG GGTCAGCCAA
CCTACCCAAC AGGGCGGCCT GGGTTTTGCC TACAAGTGGA ACATGGGCTG GATGCACGAC
ACCCTGCACT ACATCCAGAA CGACCCGGTG CACCGCACCT ACCACCACAA CGAGATGAGT
TTCGGGCTGA TCTATGCCTA TTCCGAGCAC TTCATCCTGC CCATTTCCCA TGATGAGGTG
GTGCACGGCA AGCATTCGCT GATCGACAAG ATGCCCGGCG ACCGCTGGCA GAAGTTCGCC
AACCTGCGCG CCTACCTCAC CTTCATGTGG GCACACCCGG GCAAGAAGCT GCTGTTCATG
GGCTGCGAGT TCGGCCAGTG GCGTGAGTGG GACCACGACA GCGAACTGGA CTGGTACCTG
CTGCAGTATC CCGAGCACCA AGGCGTGCAG CGCCTGGTGG GCGACCTCAA CCGCCTGTAC
CGCGAAGTGC CGGCGCTGCA CGAGCAGGAT TGCCAGCCGC AGGGCTTCCA GTGGCTGATC
GGTGACGACG CGCAAAACAG CGTGTACGCC TGGCTGCGCT GGAGCAGCAG CGGCGAGCCG
GTGCTGGTCG TGGCCAACTT TACCCCGGTA CCCCGTGAGG GTTACCGCAT TGGCGTGCCG
TTCGGCGAGC GTTGGCAGGA GCTGCTGAAC AGCGATGCCG AGCTGTATGC CGGGTCGAAC
GTGGGTAATC TGGGGGCGGT GGCCAGTGAG GCAGTGGCCA GCCACGGGCA GCCATTATCG
CTGGCCCTGA ACCTGCCGCC GCTGGGGGTG TTGATCATGA AGCCCGCCTG A
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| Protein sequence | MNVTTRENGG LRQRDLDALA RAEHADPFAV LGPHGDGAGG QVVRAFLPNA LKVRVQARDD
GRVLAEMEQG SLPGLFSAHL DEAQPYQFHI VWAGGEQVTE DPYSFGPQLG DMDLHLFAEG
NHRDLSGRFG AQPTQVDGID GVCFSVWAPN ARRVSVVGDF NNWDGRRHPM RLRHGAGVWE
LFIPRLGVGE TYKFEVLGKD GILPLKADPL ARATELPPST ASKVAGELSH AWQDHDWMAQ
RAQRHAYNAP LSIYELHPGS WRCELDEAGE VGRFYNWREL AERLVPYVQE LGFTHIELLP
IMEHPFGGSW GYQPLSMFAP TSRYGSAEDF AAFIDACHQG GIGVLLDWVP AHFPTDEHGL
ARFDGTALYE YDNPLEGYHQ DWNTLIYNLG RNEVRGFMMA SALHWLKHFH IDGLRVDAVA
SMLYRDYSRK AGEWVPNRHG GRENLEAIDF IRHLNGVAAH EAPGALIIAE ESTAWPGVSQ
PTQQGGLGFA YKWNMGWMHD TLHYIQNDPV HRTYHHNEMS FGLIYAYSEH FILPISHDEV
VHGKHSLIDK MPGDRWQKFA NLRAYLTFMW AHPGKKLLFM GCEFGQWREW DHDSELDWYL
LQYPEHQGVQ RLVGDLNRLY REVPALHEQD CQPQGFQWLI GDDAQNSVYA WLRWSSSGEP
VLVVANFTPV PREGYRIGVP FGERWQELLN SDAELYAGSN VGNLGAVASE AVASHGQPLS
LALNLPPLGV LIMKPA
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