| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1780 |
|---|
| Symbol | |
|---|
| ID | 5192509 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 2034635 |
|---|
| End bp | 2035492 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640586249 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001267118 |
|---|
| Protein GI | 148547016 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0298068 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCCAT CAACGCCACA CACTCAAAGC CCTCTGCCGA TATGCTTTAC CCCCTATGGC
CACAGTGGGG GGATCGGCGA CGCGGCCATC GCCACTGGTT TCAATGGTGT TCCGTTTGAT
ATTCACGCCA ATTGCTACCA CTTAGGCCAG GGCTATCGGG CATTCTTTCC CGGGTTAATG
CGATTCTCCA GCCCCGATAG CCTGAGCCCG TTTGGGCTCG GTGGACTGAA CGCGTATGCC
TATTGTAATG GCGACCCTGT TAACTACGGC GACCCCCAGG GCACAGCCGG AGTGCCGATT
GGGCGGACTG GGAACACCCC TCGTCCTGGG AGGGTCACCG CGAAAGGCCA ATTTGGTATT
GGCAACACAT CGCATCAAGT AAAATCCTAT AGGAACGCAA TGCGGGAGAA TGAGAAGGTG
CAGGGAGTCG ATATCGCTCT GGGCCTCTTA AATCATGAAG TTGATCTATT CAATGCCGTG
ACAAAGGATC TGAAAAAATT GGATAATACC GCCGTTCGTA GAAACCCCTT CGTCCGGGAA
AAGCTCATCA AGGCTAGTAC TGAGGCGTTT ACAGACCATA TGAAGAATGT ATTAGTCGGC
GAGAAGCGAC GGTATGCTGA TGATGTTATT TTAACCGATG CGCATAGAAA ATACCTGAGC
ACCCTCGATT CAGCATTGAT ACGTGCCTAC GCTCCGTACC GGGAACATCA GAGCCACTGG
TACCACCCTG GGTACCATAT TGAGGGGATA AGGGATACAC CCCTGTTGCT GGCACAATGG
GCAATAAGGG ACGCTAAATT ATTGCTCGAT GTCGGTGATT CACCACTTTA CCGCGGAGTC
AAGGATAGTC TGAAGTAG
|
|---|
| Protein sequence | MPPSTPHTQS PLPICFTPYG HSGGIGDAAI ATGFNGVPFD IHANCYHLGQ GYRAFFPGLM
RFSSPDSLSP FGLGGLNAYA YCNGDPVNYG DPQGTAGVPI GRTGNTPRPG RVTAKGQFGI
GNTSHQVKSY RNAMRENEKV QGVDIALGLL NHEVDLFNAV TKDLKKLDNT AVRRNPFVRE
KLIKASTEAF TDHMKNVLVG EKRRYADDVI LTDAHRKYLS TLDSALIRAY APYREHQSHW
YHPGYHIEGI RDTPLLLAQW AIRDAKLLLD VGDSPLYRGV KDSLK
|
|---|
| |