| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1778 |
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| Symbol | |
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| ID | 5192004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2032514 |
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| End bp | 2034196 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640586248 |
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| Product | AMP-binding domain protein |
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| Protein accession | YP_001267117 |
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| Protein GI | 148547015 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0198659 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAAC CGAGCTATAC CCGCGGTCGC CAGGACCGAC CCTTGCTGAC CCAGACCATC
GGCCAGGCCT TTGATGCCAC CGTGGCCCGC TGTTGCGACA GCGAGGCCCT GGTGTCCCGC
CACCAGGGCT TGCGTTACAG CTGGCGGCAG TTGGCCGAAC AGGTCGAAAT ACACGCCCGC
GCGCTGATCG CACTGGGCGT GAACACCGGC GACCGTGTTG GCATCTGGTC GCCCAACTGC
GCCCAGTGGT GCATCTTGCA GTTGGCCAGT GCCAAGGTCG GCGCCATCCT GGTCAACATC
AACCCGGCCT ACCGTGTGGG CGAACTGGAG TACGTGTTGC GTCAGTCCGG CTGCCGCTGG
CTGGTCTGCG CTGAAGCCTT CAAGACGTCT GATTACCACG CCATGGTGCA GGCGCTGGTG
CCTGAGCTGG CCAGCGCCCG GCCTGGTGAG CTGGCCAGTG AATGCCTGCC CCAGTTGCGT
GGCGTCATCA GCCTGGCCAC CAACCCGCCT GCCGGTTTCC TGCCCTGGCA CGCACTGGCC
GAGCGAGCAG GGCAGACGTC TGCCGAAGCC TGCACAGCCC GTCAGCAAAG CCTGCAATTC
GATCAGCCGG TGAACATCCA GTACACCTCC GGCACCACCG GTGCGCCCAA AGGTGCCACG
CTCAGTCACT ACAACATCCT CAACAACGGT TTCATGGTGG GTGAAAGCCT AGGCCTGACG
GCCCGCGACC GTATGGTGAT CCCGGTGCCG CTGTACCATT GCTTCGGCAT GGTCATGGCC
AACCTCGGCT GCATCACCCA CGGCAGCACC ATGATCTACC CCAACGACGC CTTCGACGCC
GAGCTCACCC TGCGCGCCGT GGCCGAGGAG CGTGCCAGCA TCCTGTACGG CGTGCCGACC
ATGTTCATCG CCATGCTCGA CCACCCGTCG CGCGCGCAGA TGGACCTGTC GACCCTGCGC
AGCGGCATCA TGGCCGGCGC CACCTGCCCG ATCGAGGTGA TGCGCCGGGT CATCGACCAG
ATGCACATGG CTGAAGTGCA GATCGCCTAC GGCATGACCG AAACCAGCCC GGTGTCACTG
CAGACCGGCC CGGACGACGA CCTGGAGCTG CGCGTGACCA CCGTCGGGCG CACCCAGCCG
CAGCTGGAAA ACAAACTGGT GGACGCCGAC GGCTGCATCA TCGCCCGCGG CGAGATTGGC
GAACTGTGCA CCCGCGGCTA CAGCGTGATG CTGGGCTACT GGGACAACCC CCAGGCCACG
GCGGATGCCA TCGACCCGGC CGGCTGGATG CATTCGGGCG ACCTGGCGGT GATGGATGAG
CAGGGCTATG TGCGAATCGT CGGGCGCAAC AAGGACATGA TCATTCGCGG CGGCGAGAAC
ATTTACCCGC GTGAGCTGGA AGAGTTTTTC TACACCCACC CGGCGGTGGC CGATGCGCAG
GTGATCGGCA TTCCGTGCAG CCGCTATGGC GAAGAGATCG TCGCCTGGAT CAAGCTGCAC
CCTGGGCACA GCGCCACGGC CGAGGAGCTG CAGGGCTGGT GCAAGGCGCG CATTGCCCAC
TTCAAGGTGC CGCGGTATAT CCGTTTCGTT GACGAATACC CGATGACGGT GACAGGCAAG
GTGCAAAAAT TCAGGATGCG TGAGATCAGT GTCGCAGAAA TTTCGGCTGT TTCTGCAGGT
TGA
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| Protein sequence | MSQPSYTRGR QDRPLLTQTI GQAFDATVAR CCDSEALVSR HQGLRYSWRQ LAEQVEIHAR
ALIALGVNTG DRVGIWSPNC AQWCILQLAS AKVGAILVNI NPAYRVGELE YVLRQSGCRW
LVCAEAFKTS DYHAMVQALV PELASARPGE LASECLPQLR GVISLATNPP AGFLPWHALA
ERAGQTSAEA CTARQQSLQF DQPVNIQYTS GTTGAPKGAT LSHYNILNNG FMVGESLGLT
ARDRMVIPVP LYHCFGMVMA NLGCITHGST MIYPNDAFDA ELTLRAVAEE RASILYGVPT
MFIAMLDHPS RAQMDLSTLR SGIMAGATCP IEVMRRVIDQ MHMAEVQIAY GMTETSPVSL
QTGPDDDLEL RVTTVGRTQP QLENKLVDAD GCIIARGEIG ELCTRGYSVM LGYWDNPQAT
ADAIDPAGWM HSGDLAVMDE QGYVRIVGRN KDMIIRGGEN IYPRELEEFF YTHPAVADAQ
VIGIPCSRYG EEIVAWIKLH PGHSATAEEL QGWCKARIAH FKVPRYIRFV DEYPMTVTGK
VQKFRMREIS VAEISAVSAG
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