| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1770 |
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| Symbol | |
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| ID | 5193901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2023705 |
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| End bp | 2024220 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640586240 |
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| Product | sigma-70, region 4 type 2 |
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| Protein accession | YP_001267109 |
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| Protein GI | 148547007 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000010187 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000356694 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACCCGTC TGCTGCTGCC CCTTGAGCAC CCCACTCCTG CTGCCGAGCA CGATGCCGAC
GATGCCCTGA TGCATGCACT GAAGCGGCTA CCACGGCGCG TACAGCAAGT ATTCCTGCTC
AACCGCCTCG ATCAGCTGGA CTTCGCCAGC ATCGCTGCGC GCCTTGACCT GCCACTGGCG
ACTATCGAGC GCAACATGGG CCAGGCGCTG CAGGCTGGCC GCTCGCGCCG GGATGTGCTG
GCGAGCGTGG CCGGGCAATG GTATGTGCGC TTGCAGAGCC CGCAGGTGAC GGCGTGCGAG
CGTATCGACT TCCGCCGCTG GCTGGATGCC GATACGGCAA ACTTGCAAGC GTTTCACGAT
ACGGAACTGC GGTGGCGCAG CCTGCTGGTG CCGGCACGGC AACTGGGCCA TGACGGCTGG
TATCGGCAAG GCCGGGCGGC GCTGTCGCTG GGCGGCTGCT CGGTTGCGGT CGGGCTGGGC
GTGGCGGCGT TGGTGCTGGT TGGGTTCTGG GCTTGA
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| Protein sequence | MTRLLLPLEH PTPAAEHDAD DALMHALKRL PRRVQQVFLL NRLDQLDFAS IAARLDLPLA
TIERNMGQAL QAGRSRRDVL ASVAGQWYVR LQSPQVTACE RIDFRRWLDA DTANLQAFHD
TELRWRSLLV PARQLGHDGW YRQGRAALSL GGCSVAVGLG VAALVLVGFW A
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