Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1762 |
Symbol | |
ID | 5192395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 2017595 |
End bp | 2017981 |
Gene Length | 387 bp |
Protein Length | 128 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640586232 |
Product | hypothetical protein |
Protein accession | YP_001267102 |
Protein GI | 148547000 |
COG category | [S] Function unknown |
COG ID | [COG3189] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00227647 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTCGCT GCAAACGTGT CTATGATGCG GTTGAGGATG AAGATGGCCA GCGTGTACTG GTCGACCGCC TTTGGCCGCG CAACAAGCGC AAGGATGACC TCCATGGGCA GTGGTTGCGC GAAGTGGCAC CTTCGAATGA ATTGCGTAAG GCGTTCCATC AGGGTGAAGT GGATTTCGCC GGTTTTACCC AGCGGTACCA GCAAGCGCTG GCGGCCCACC CCGAACACTG GTACCCGCTG CTGGACATGG CCAGGAAGGG GACGCTGACA TTGCTTTATG CCGGCAAGGA CAGCGAGCAC AACAATGCCC GGGTGCTGGC CGACTGGTTG GAAAACGAAC TGGACAGGTG TGGCCCTGGC AGTTCGCCAG TGTGTTATGC CCAATGA
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Protein sequence | MIRCKRVYDA VEDEDGQRVL VDRLWPRNKR KDDLHGQWLR EVAPSNELRK AFHQGEVDFA GFTQRYQQAL AAHPEHWYPL LDMARKGTLT LLYAGKDSEH NNARVLADWL ENELDRCGPG SSPVCYAQ
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