Gene Pput_1762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1762 
Symbol 
ID5192395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2017595 
End bp2017981 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content58% 
IMG OID640586232 
Producthypothetical protein 
Protein accessionYP_001267102 
Protein GI148547000 
COG category[S] Function unknown 
COG ID[COG3189] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00227647 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTCGCT GCAAACGTGT CTATGATGCG GTTGAGGATG AAGATGGCCA GCGTGTACTG 
GTCGACCGCC TTTGGCCGCG CAACAAGCGC AAGGATGACC TCCATGGGCA GTGGTTGCGC
GAAGTGGCAC CTTCGAATGA ATTGCGTAAG GCGTTCCATC AGGGTGAAGT GGATTTCGCC
GGTTTTACCC AGCGGTACCA GCAAGCGCTG GCGGCCCACC CCGAACACTG GTACCCGCTG
CTGGACATGG CCAGGAAGGG GACGCTGACA TTGCTTTATG CCGGCAAGGA CAGCGAGCAC
AACAATGCCC GGGTGCTGGC CGACTGGTTG GAAAACGAAC TGGACAGGTG TGGCCCTGGC
AGTTCGCCAG TGTGTTATGC CCAATGA
 
Protein sequence
MIRCKRVYDA VEDEDGQRVL VDRLWPRNKR KDDLHGQWLR EVAPSNELRK AFHQGEVDFA 
GFTQRYQQAL AAHPEHWYPL LDMARKGTLT LLYAGKDSEH NNARVLADWL ENELDRCGPG
SSPVCYAQ