Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1757 |
Symbol | |
ID | 5193602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2011794 |
End bp | 2012690 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640586227 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001267097 |
Protein GI | 148546995 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0074148 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCAAAC GCCTGATGCC TTCGACCACC GCCCTTCAGT GCTTCGAAGC GGCCGCTCGC CACCTCAGCT TCACCCGCGC GGCCCAGGAA CTGCACCTGA CCCAGAGCGC CGTCAGCAAG CAGGTCGCGC AGCTTGAAGA CATGCTCTCG CACTCGCTGT TCCAGCGCAT TCGCCGGCGC CTGCACCTGA CCCCGGCCGG CGCGCTGTAC CTCACCGAAG TGAACAAGAT CCTCACCCAG ATCGACATAT CCAGCCGCTA CATCCTCAGC TACGGCGACG AAACCGAAGT GCTGCGCATC GCCACCCAGC CGACCTTCGG CGCCCGCTGG CTGGTGCCCC GGCTCAAGGG TTTTGGTGAC CGCTACCCAC GCATTCACCT GGATGTGCGC AACGAGCTGG AGCCATTCGA CCTGGTACAG GCCAAGGCTG ACGTCGCCTT TTTCTTCGGC CAGGGCACCT GGCCCGGGGC GACCTGCATC GAGTTGTTCA GCGAAGAAGT GGTGCCGGTG TGCAGCCCGC AGCTGCTGGC CAGCCACCGT TTCGACAGCG CCCAGGCATT GACTGAGCAC CGCCTGTTGC AATGCGTGTC GCGGCCGGAG GCCTGGCATG AGTGGTTCCT GGGGCTTGGC TTGCATAGCC AGAACAGCTA CCACGGGCCG CGCTTCGACA CGTTCTACCT GTGTATCCGC GCGGCCATCT CCGGCTGCGG CATAGCCCTG ATTCCCCGCT ATCTGGTGGC CGAAGAGCTG AGCGAAGGCA AGCTGGTGGT GGCCTGGGAC CACCCTGTGG CAAGCAACGG GAGGCACTTC ATTGCGCATG CCGAGCATGC GGCCGAAGTG CCCAAGATCA GGGCCTTCGT GCAGTGGATC CGGGAGCGGG TGGCTGAAGG CGATTGA
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Protein sequence | MSKRLMPSTT ALQCFEAAAR HLSFTRAAQE LHLTQSAVSK QVAQLEDMLS HSLFQRIRRR LHLTPAGALY LTEVNKILTQ IDISSRYILS YGDETEVLRI ATQPTFGARW LVPRLKGFGD RYPRIHLDVR NELEPFDLVQ AKADVAFFFG QGTWPGATCI ELFSEEVVPV CSPQLLASHR FDSAQALTEH RLLQCVSRPE AWHEWFLGLG LHSQNSYHGP RFDTFYLCIR AAISGCGIAL IPRYLVAEEL SEGKLVVAWD HPVASNGRHF IAHAEHAAEV PKIRAFVQWI RERVAEGD
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