| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1756 |
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| Symbol | |
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| ID | 5194631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2010363 |
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| End bp | 2011613 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640586226 |
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| Product | aminotransferase class-III |
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| Protein accession | YP_001267096 |
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| Protein GI | 148546994 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00824203 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACCAGG AAAGTATCAG CCAATCCATT GCCATCGTTC ACCCGATCAC ACTTTCCCAT
GGCCGTAATG CCGAAGTCTG GGACACTGAC GGCAAACGTT ACATCGACTT CGTCGGCGGT
ATCGGCGTGC TCAACCTGGG CCACTGCAAC CCCGCTGTAG TCGAGGCCAT CCAGGCTCAG
GCCACCCGCC TGACCCACTA CGCCTTCAAC GCGGCCCCTC ACGGCCCGTA CCTGGCCCTG
ATGGAGCAAC TGAGCCAGTT TGTGCCAGTC AGCTACCCAC TGGCCGGCAT GCTCACCAAC
AGCGGCGCGG AAGCGGCGGA AAACGCCCTG AAAGTGGCCC GCGGCGCCAC CGGCAAACGC
GCCATCATCG CGTTCGACGG CGGCTTCCAT GGCCGCACCC TGGCCACCCT GAACCTCAAT
GGCAAGGTCG CCCCCTACAA GCAGCGGGTC GGCGAACTGC CCGGGCCGGT GTACCACCTG
CCCTACCCGG GCGCGGATAC CGGGGTTACC TGCGAACAGG CACTCAAGGC CATGGATCGC
CTGTTCAGCG TCGAGCTGGC CGTGGAGGAC GTCGCGGCGT TCATCTTCGA GCCGGTGCAG
GGTGAAGGCG GCTTCCTTGC CCTGGACCCG GCCTTCGCCC AGGCCCTGCG CCGCTTCTGC
GACGAGCGTG GCATCCTAAT CATCATCGAC GAGATCCAGT CGGGCTTCGG CCGCACCGGC
CAGCGCTTCG CGTTTCCGCG CCTGGGTATC GAGCCCGACC TGCTGCTGCT GGCCAAGAGC
ATCGCTGGCG GTATGCCGCT GGGTGCAGTG GTCGGGCGCA AGGAATTGAT GGCGGCGCTG
CCCAAGGGCG GCCTGGGTGG CACCTATTCG GGCAACCCGA TTGCCTGTGC GGCGGCCTTG
GCCAGCCTGG CGCAGATGAC CGACGAAAAC GTTGCAACCT GGGGTGAACG GCTGGAACAG
GCCATCGTCA GCCGTTATGA GCGCTGGAAG GCTTCGGGCC TGAGCCCGTA CATCGGCCGC
CTGACCGGCG TGGGCGCCAT GCGAGGGATC GAGTTCGCCA ATGCCGATGG CAGCCCGGCA
CCGGCACAAC TGGCCAAGGT GATGGAAGCG GCCCGCGCCA AGGGCCTGCT GCTGATGCCC
AGCGGCAAGG CGCGGCACAT CATTCGCCTG CTGGCGCCGT TGACCATCGA GGCCGAGGTG
CTCGAGGAAG GGCTGGATAT CCTCGAGCAG TGCCTGGCAG AACTGAACTG A
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| Protein sequence | MNQESISQSI AIVHPITLSH GRNAEVWDTD GKRYIDFVGG IGVLNLGHCN PAVVEAIQAQ
ATRLTHYAFN AAPHGPYLAL MEQLSQFVPV SYPLAGMLTN SGAEAAENAL KVARGATGKR
AIIAFDGGFH GRTLATLNLN GKVAPYKQRV GELPGPVYHL PYPGADTGVT CEQALKAMDR
LFSVELAVED VAAFIFEPVQ GEGGFLALDP AFAQALRRFC DERGILIIID EIQSGFGRTG
QRFAFPRLGI EPDLLLLAKS IAGGMPLGAV VGRKELMAAL PKGGLGGTYS GNPIACAAAL
ASLAQMTDEN VATWGERLEQ AIVSRYERWK ASGLSPYIGR LTGVGAMRGI EFANADGSPA
PAQLAKVMEA ARAKGLLLMP SGKARHIIRL LAPLTIEAEV LEEGLDILEQ CLAELN
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