| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1748 |
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| Symbol | |
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| ID | 5193642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1999917 |
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| End bp | 2001242 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640586218 |
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| Product | isocitrate lyase |
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| Protein accession | YP_001267088 |
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| Protein GI | 148546986 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2224] Isocitrate lyase |
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| TIGRFAM ID | [TIGR01346] isocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.191807 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACTGA CACGCGAACA GCAAATTGCA GCCCTCGAGA AAGACTGGGC CGAAAACCCG
CGCTGGAAAG GCGTGACCCG TACCTACACC GCCGCTGATG TCGTTCGCCT GCGTGGCTCC
GTGCAACCTG AGCACACCTT TGCGCGTCAG GGCGCAGAAA AACTGTGGAA GCTGGTCACC
GAAGGTGCCC ACCCGTCCTT CCGCCCCGAA AAAGATTTCG TCAACTGCAT GGGCGCCCTG
ACGGGCGGCC AGGCTGTACA GCAGGTCAAG GCCGGCATCC AGGCCATCTA CCTGTCCGGC
TGGCAGGTTG CCGCCGACAA CAACTCGGCC GAGTCGATGT ACCCTGACCA GTCGCTGTAC
CCGGTCGACT CGGTACCGAC CGTGGTCAAA CGCATCAACA ACGCGTTCCG CCGCGCCGAC
CAGATCCAGT GGAAAGCCGG CAAGAACCCG GGCGACGAAG GGTACATCGA CTACTTCGCG
CCCATCGTGG CCGACGCCGA AGCCGGTTTC GGTGGCGTAC TGAACGCCTA CGAGCTGATG
AAGAACATGA TCGAAGCAGG CGCCGCCGGC GTGCACTTCG AAGACCAGCT GGCCTCGGTT
AAAAAATGCG GCCACATGGG CGGCAAGGTG CTGGTGCCGA CTCAGGAAGC CGTACAGAAG
CTGGTGGCCG CTCGCCTGGC CGCTGACGTG TCGGGTGTAC CGACCATCAT TCTGGCCCGC
ACCGACGCCA ACGCCGCCGA CCTGCTGACC AGCGACTGCG ACCCGTACGA CCAGCCGTTC
GTGGTTGGCG AGCGCACCCG CGAAGGCTTC TACAAGGTCC GTGCCGGCCT CGATCAGGCC
ATTGCCCGCG GCCTGGCCTA TGCCCCGTAC GCCGACCTGA TCTGGTGTGA AACCGCCAAG
CCGGACCTGG ACGAAGCCCG TCGCTTCGCC GAGGCGATCA AGAAGGAGTA CCCGGACCAG
ATCCTGTCGT ACAACTGCTC GCCTTCCTTC AACTGGAAGA AAAACCTGGA CGACGCCACC
ATCGCCAAGT TCCAGCGCGA ACTGTCGGCC ATGGGTTACA AGCATCAGTT CATCACCCTG
GCCGGCATCC ACAACATGTG GCACGGCATG TTCAACCTGG CGCACGACTA CGCCCGCAAC
GACATGACCG CCTACGTGAA GCTGCAGGAG CAGGAATTCG CTGACGCCAG CAAGGGCTAC
ACCTTCGTGG CGCACCAGCA GGAAGTGGGC ACTGGCTACT TCGACGACAT GACCACCGTG
ATCCAGGGTG GCGCTTCGTC GGTGACTGCA CTGACCGGCT CGACCGAGGA AGAGCAGTTC
CACTGA
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| Protein sequence | MALTREQQIA ALEKDWAENP RWKGVTRTYT AADVVRLRGS VQPEHTFARQ GAEKLWKLVT
EGAHPSFRPE KDFVNCMGAL TGGQAVQQVK AGIQAIYLSG WQVAADNNSA ESMYPDQSLY
PVDSVPTVVK RINNAFRRAD QIQWKAGKNP GDEGYIDYFA PIVADAEAGF GGVLNAYELM
KNMIEAGAAG VHFEDQLASV KKCGHMGGKV LVPTQEAVQK LVAARLAADV SGVPTIILAR
TDANAADLLT SDCDPYDQPF VVGERTREGF YKVRAGLDQA IARGLAYAPY ADLIWCETAK
PDLDEARRFA EAIKKEYPDQ ILSYNCSPSF NWKKNLDDAT IAKFQRELSA MGYKHQFITL
AGIHNMWHGM FNLAHDYARN DMTAYVKLQE QEFADASKGY TFVAHQQEVG TGYFDDMTTV
IQGGASSVTA LTGSTEEEQF H
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