Gene Pput_1745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1745 
Symbol 
ID5192206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1997480 
End bp1998157 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content59% 
IMG OID640586215 
ProductNADH dehydrogenase subunit B 
Protein accessionYP_001267085 
Protein GI148546983 
COG category[C] Energy production and conversion 
COG ID[COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR01957] NADH-quinone oxidoreductase, B subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.440453 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.328312 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATACA ATCTCACCAG AATCGATCCG GATGCGCCCA ACGAGCAGTA CCCGGTCGGT 
GAACGGGAAA CCGTCACCGA TCAACTGCTA GAGGACCAGG TCCACAAGAA CATCTTCATG
GGCAAACTCG AAGATGTGCT GCGTGGTGCG GTCAACTGGG GTCGCAAGAA CTCCCTCTGG
CCGTACAACT TCGGCCTGTC CTGCTGCTAC GTGGAAATGA CCACGGCCTT CACGGCACCC
CACGACATCG CCCGCTTCGG CGCCGAAGTC ATCCGGGCCT CGCCGCGTCA GGCCGACTTC
ATGGTCATTG CCGGTACCTG CTTCGTGAAG ATGGCGCCGA TCATCCAGCG CCTGTACGAG
CAGATGCTCG AACCAAAATG GGTCATTTCC ATGGGTTCGT GCGCCAACTC CGGTGGCATG
TACGACATCT ACTCGGTCGT TCAGGGGGTC GACAAGTTCC TCCCCGTGGA CGTCTATGTG
CCTGGCTGCC CGCCACGCCC TGAGGCTTTC CTGCAAGGCT TGATGCTGTT GCAGGAGTCG
ATTGGCCAAG AACGACGCCC GCTTTCCTGG GTTGTTGGTG ATCAAGGTAT TTACCGTGCC
GAGATGCCAG CCCAGAAAGA CCTGCGTCGT GAGCAGCGCA TTGCAGTAAC CAACCTGCGC
AGCCCCGACG AAGTCTGA
 
Protein sequence
MQYNLTRIDP DAPNEQYPVG ERETVTDQLL EDQVHKNIFM GKLEDVLRGA VNWGRKNSLW 
PYNFGLSCCY VEMTTAFTAP HDIARFGAEV IRASPRQADF MVIAGTCFVK MAPIIQRLYE
QMLEPKWVIS MGSCANSGGM YDIYSVVQGV DKFLPVDVYV PGCPPRPEAF LQGLMLLQES
IGQERRPLSW VVGDQGIYRA EMPAQKDLRR EQRIAVTNLR SPDEV