| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1744 |
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| Symbol | |
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| ID | 5193822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1995619 |
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| End bp | 1997400 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640586214 |
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| Product | bifunctional NADH:ubiquinone oxidoreductase subunit C/D |
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| Protein accession | YP_001267084 |
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| Protein GI | 148546982 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7
[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
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| TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C
[TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0734404 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.199576 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCGG ACAACGCTAT TTTCATTCCG CCCTACAAGG CTGACGACCA GGATGTGGTC
GTCGAACTGA ACAACCGTTT TGGCGCCGAA GCATTCGTCG CCCAGGAGAC CCGCACCGGC
ATGCCCGTGC TGTGGGTAAA ACGCGCCCAG CTCAAAGAGG TGCTCAGCTT CCTGCGCGGC
GTCGCCAAGC CTTACAGCAT GCTGTACGAC CTGCATGGCG TCGACGAGCG CCTGCGCACC
CAGCGCCGTG GCCTGCCAGC CGCCGATTTC AGCGTGTTCT ACCACCTGTT GTCGATCGAG
CGTAACAGCG ATGTGATGAT CAAGGTGTCG CTCAGCGAAG GCGACCTGAA CCTGCCGACC
GTGACGGGCA TCTGGCCAAA CGCCAACTGG TACGAGCGCG AAGTCTGGGA CATGTTCGGC
ATCGACTTTG CCGGCCACCC GCACCTCAGC CGCATCATGA TGCCGCCGAC CTGGGAAGGT
CACCCGCTGC GCAAGGACTA CCCTGCCCGT GCGACCGAGT TCGACCCCTA CAGCCTGACC
CTGGCCAAGC AGCAGCTTGA AGAGGAATCG GCACGCTTCA ACCCGGAAGC CTGGGGCATG
AAACGTCAGG GCGCCAACGA GGACTACATG TTCCTCAACC TCGGCCCCAA CCACCCTTCG
GCGCACGGTG CGTTCCGTAT CGTCCTGCAG CTGGACGGTG AAGAAATCGT CGACTGCGTA
CCGGACATCG GCTACCACCA CCGTGGCGCC GAAAAAATGG CCGAGCGCCA GTCCTGGCAC
AGCTTCATCC CCTATACCGA CCGTATCGAT TACCTCGGCG GGGTGATGAA CAACCTGCCG
TACGTGCTTG CGGTAGAGAA GCTGGCCGGC ATCAAGGTGC CGCAGAAGGT CGACGTGATT
CGCATCATGC TGGCCGAGTT CTTCCGCATC ACCAGCCACC TGCTGTTCCT GGGTACCTAC
ATCCAGGACG TCGGCGCCAT GACCCCGGTG TTCTTCACCT TCACCGACCG CCAGCGCGCC
TACACCGTGA TCGAAGCGAT CACCGGTTTC CGCCTGCACC CGGCCTGGTA CCGCATCGGT
GGCGTCGCCC ACGACCTGCC ACGTGGCTGG GACAAGCTGG TCAAGGACTT TGTCGAGTGG
CTGCCCAAGC GCCTCGACGA ATACACCAAG GCCGCCCTGC AAAACAGCAT CCTCAAGGGC
CGTACCATCG GCGTTGCCGC GTACAACACC AAGGAAGCGC TGGAATGGGG CACCACCGGT
GCCGGCTTGC GTGCCACCGG TTGCAACTTC GACCTGCGTA AAGCCCGTCC TTACTCCGGC
TACGAAAACT TCGAGTTCGA AGTACCGCTG GCCCACAACG GCGATGCCTA CGATCGCTGC
ATGGTCCGTG TCGAGGAGAT GCGTCAGAGT ATCCGCATCA TCGACCAGTG CCTGCGCAAC
ATGCCGGAAG GCCCGTACAA GGCGGATCAC CCGCTGACCA CGCCGCCGCC GAAAGAGCGC
ACCCTGCAGC ACATCGAAAC CCTGATCACG CACTTCCTGC AAGTCTCGTG GGGCCCGGTC
ATGCCGGCCA ACGAGTCGTT CCAGATGATC GAAGCGACCA AGGGCATCAA CAGTTACTAC
CTGACGAGCG ATGGCGGCAC CATGAGCTAC CGCACCCGGA TCCGCACCCC GAGCTACCCG
CACCTGCAGC AGATCCCTTC GGTGATCAAA GGCAGCATGG TTGCCGACCT CATTGCGTAC
CTGGGCAGTA TCGACTTCGT TATGGCTGAC GTGGACCGCT AA
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| Protein sequence | MTADNAIFIP PYKADDQDVV VELNNRFGAE AFVAQETRTG MPVLWVKRAQ LKEVLSFLRG
VAKPYSMLYD LHGVDERLRT QRRGLPAADF SVFYHLLSIE RNSDVMIKVS LSEGDLNLPT
VTGIWPNANW YEREVWDMFG IDFAGHPHLS RIMMPPTWEG HPLRKDYPAR ATEFDPYSLT
LAKQQLEEES ARFNPEAWGM KRQGANEDYM FLNLGPNHPS AHGAFRIVLQ LDGEEIVDCV
PDIGYHHRGA EKMAERQSWH SFIPYTDRID YLGGVMNNLP YVLAVEKLAG IKVPQKVDVI
RIMLAEFFRI TSHLLFLGTY IQDVGAMTPV FFTFTDRQRA YTVIEAITGF RLHPAWYRIG
GVAHDLPRGW DKLVKDFVEW LPKRLDEYTK AALQNSILKG RTIGVAAYNT KEALEWGTTG
AGLRATGCNF DLRKARPYSG YENFEFEVPL AHNGDAYDRC MVRVEEMRQS IRIIDQCLRN
MPEGPYKADH PLTTPPPKER TLQHIETLIT HFLQVSWGPV MPANESFQMI EATKGINSYY
LTSDGGTMSY RTRIRTPSYP HLQQIPSVIK GSMVADLIAY LGSIDFVMAD VDR
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