| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1736 |
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| Symbol | |
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| ID | 5190418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1986677 |
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| End bp | 1988530 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640586206 |
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| Product | NADH dehydrogenase subunit L |
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| Protein accession | YP_001267076 |
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| Protein GI | 148546974 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.235558 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.436531 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTTC TCTTCCTGAC TTTCGTCTTT CCCCTCATCG GCTTCCTGCT GCTGTCGTTC
TCGCGCGGAC GGTTCTCGGA GAACCTGTCC GCCCTGATCG GCGTCGGCTC GGTAGGCCTG
TCGGCCGCCA CGGCCGCTTA CGTCATCTGG CAGTTCAACG TCGCCCCGCC TGAGGGCGGC
GCGTACAGCC AGCTGCTGTG GCAGTGGATG TCGGTGGACG GCTTCGCGCC GAACTTCACC
CTGTACCTGG ACGGCCTGTC GGTCACCATG CTCGGTGTGG TGACCGGTGT CGGCTTCCTG
ATCCACCTGT TCGCATCCTG GTACATGCGT GGCGAAGCCG GCTACTCGCG CTTCTTCTCG
TACACCAACC TGTTCATCGC CAGCATGCTG TTCCTGATCC TTGGCGATAA CCTGCTGTTC
ATCTACTTCG GCTGGGAAGG CGTGGGCCTG TGCTCGTACC TGTTGATCGG TTTCTACTAC
AGCAACCGCA ACAACGGTAA CGCGGCACTC AAGGCATTCA TCGTCACCCG TATCGGCGAC
GTGTTCATGG CCATCGGCCT GTTCATCCTG TTTGCCCAGC TGGGCACCCT GAACGTGCAG
GAACTGCTGG TGCTGGCACC GCAGAAGTTC CAGGCTGGCG ACACCTGGAT GGTGCTGGCC
ACGCTGATGC TGCTGGGTGG TGCGGTCGGT AAATCGGCAC AGCTGCCACT GCAGACCTGG
CTGGCCGACG CCATGGCGGG CCCGACTCCG GTTTCGGCAC TGATCCACGC CGCAACCATG
GTGACCGCGG GCGTGTACCT GATCGCCCGT ACCAACGGCC TGTTCTTGCT GGCGCCGGAC
ATCCTGCACC TTGTAGGTGT GGTCGGTGGC GTGACCCTGG TACTGGCAGG CTTCGCTGCG
CTGGTACAGA CCGATATCAA GCGTATCCTC GCCTACTCGA CCATGAGCCA GATCGGCTAC
ATGTTCCTGG CCCTGGGCGT GGGTGCCTGG GACGCGGCGA TCTTCCACCT GATGACCCAC
GCCTTCTTCA AGGCCCTGCT GTTCCTTGCC TCCGGTGCGG TGATCGTTGC CTGCCACCAC
GAGCAGAACA TCTTCAAGAT GGGCGGCCTG TGGAAGAAGC TGCCGCTGGC CTACGCCAGC
TTCGTGGTCG GTGGTGCGGC ACTGGCGGCC CTGCCGATCG TGACCGTAGG CTTCTACTCC
AAAGACGAGA TCCTCTGGGA AGCCTTCGCC AGCGGCAACA CCGGCCTGCT GTATGCCGGC
CTGGTAGGCG CGTTCATGAC CTCGCTGTAC ACCTTCCGCC TGATCTTCAT CGCCTTCCAT
GGCGAAGCCA AGACCGAAGC CCACGCGGGC CACGGCATCA GCCACTGGCT GCCGCTGGGC
GTGCTGATCG TGCTGTCGAC CTTCGTCGGC GCCTGGATCA CCCCGCCGCT GGCCGGTGTG
CTGCCAGAAA GCGCCGGCCA TGCCGGTGGC GAAGCCAAGC ACGCGCTGGA GATCACCTCG
GGTGCCATCG CCATCGCCGG TATCCTGCTG GCCGCCCTGC TGTTCCTGGG CAAGCGCCGC
TTCGTCAGCG CCGTCGCCAA CAGTGGCATC GGTCGCGTCC TGTCGGCCTG GTGGTTCGCT
GCCTGGGGCT TCGACTGGAT CTACGACAAG CTTTTCGTCA AACCGTACCT GCTGATCAGC
CACATCCTGC GCAAGGACCC GGTTGACCGC ACCATCGGCC TGATTCCTCG GATGGCGCGT
GGTGGCCACG TGGCCATGAG CAAGACCGAG ACTGGCCAAC TGCGCTGGTA CACCGCCTCT
ATCGCCGTGG GTGCCGTGCT GGTGCTCGGT GCCGTGGTAG TGGCTGCGGT ATGA
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| Protein sequence | MNLLFLTFVF PLIGFLLLSF SRGRFSENLS ALIGVGSVGL SAATAAYVIW QFNVAPPEGG
AYSQLLWQWM SVDGFAPNFT LYLDGLSVTM LGVVTGVGFL IHLFASWYMR GEAGYSRFFS
YTNLFIASML FLILGDNLLF IYFGWEGVGL CSYLLIGFYY SNRNNGNAAL KAFIVTRIGD
VFMAIGLFIL FAQLGTLNVQ ELLVLAPQKF QAGDTWMVLA TLMLLGGAVG KSAQLPLQTW
LADAMAGPTP VSALIHAATM VTAGVYLIAR TNGLFLLAPD ILHLVGVVGG VTLVLAGFAA
LVQTDIKRIL AYSTMSQIGY MFLALGVGAW DAAIFHLMTH AFFKALLFLA SGAVIVACHH
EQNIFKMGGL WKKLPLAYAS FVVGGAALAA LPIVTVGFYS KDEILWEAFA SGNTGLLYAG
LVGAFMTSLY TFRLIFIAFH GEAKTEAHAG HGISHWLPLG VLIVLSTFVG AWITPPLAGV
LPESAGHAGG EAKHALEITS GAIAIAGILL AALLFLGKRR FVSAVANSGI GRVLSAWWFA
AWGFDWIYDK LFVKPYLLIS HILRKDPVDR TIGLIPRMAR GGHVAMSKTE TGQLRWYTAS
IAVGAVLVLG AVVVAAV
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