| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1735 |
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| Symbol | |
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| ID | 5190417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1985104 |
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| End bp | 1986636 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640586205 |
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| Product | NADH dehydrogenase subunit M |
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| Protein accession | YP_001267075 |
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| Protein GI | 148546973 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
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| TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00591275 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.538145 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTTGC CTTGGCTGAT CCTGATCCCC TTCATCGGCG GCTTCCTGTG CTGGCTGGGT
GAGCGCTTCG GCGCCACCCT GCCGCGCTGG ATCGCGCTGC TTACCATGTC CCTGCTGCTT
GGCATCGGCC TGTGGCTGTG GGGTACCGGC GACTACACCC TTGCTCCCGC CCCGGGCGCC
GAACCGGCCT GGGCCCTGGA ATACAAAGTC CAGTGGATCC AGCGCTTCGG CATCAGCATC
CACCTGGCCC TTGATGGCCT GTCGCTGCTG ATGATCCTGC TCACCGGCCT GCTCGGTGTG
CTGTCGGTAC TGTGTTCCTG GAAAGAGATC CAGCGCCACG TCGGCTTCTT CCACCTCAAC
CTGATGTGGA TCCTCGGCGG CGTGGTCGGT GTGTTCCTGG CCCTGGACCT GTTCCTGTTC
TTCTTCTTCT GGGAAATGAT GCTGGTGCCG ATGTATTTCC TCATCGCGCT CTGGGGTCAC
AGCTCGGCAG ATGGCAAGAA GACCCGGATC TACGCGGCGA CCAAGTTCTT CATCTTCACC
CAGGCCAGCG GCCTGATCAT GCTGGTGGCG ATCCTGGGCC TGGTGCTGGT CAACTACAAC
ACCACTGGCG TGCTCACCTT CAACTACAGC GACCTGCTCA AGGCCGAGTT GCCAGCCGGT
ATCGAGTACG TGCTGATGCT GGGCTTCTTC ATCGCCTTCG CGGTGAAGCT GCCGGTGGTG
CCGTTCCACT CCTGGCTGCC TGACGCTCAC GCCCAGGCAC CGACTGCAGG CTCGGTGGAC
CTGGCGGGTA TCTTGCTGAA GACCGCGGCC TACGGCCTGC TGCGCTTCGC CCTGCCGCTG
TTCCCGAACG CCTCGGCCGA GTTCGCGCCG ATCGCCATGA CCCTGGGCCT GATCGGTATC
TTCTACGGTG CCTTCCTGGC CTTCGCACAA ACCGACATCA AGCGCCTGAT CGCCTTCTCC
AGCGTCTCGC ACATGGGCTT CGTGCTGATC GGTATCTACT CCGGCAGCCA GCAGGCCCTG
CAAGGTGCGG TGATCCAGAT GCTGGCCCAC GGCCTGTCGG CTGCGGCGCT GTTCATCCTG
TCCGGCCAGC TGTACGAGCG CCTGCACACC CGTGACATGC GCCAGATGGG TGGCCTGTGG
CACCGCATCG CTTACCTGCC GGCCATCAGC CTGTTCTTCG CAGCGGCATC GCTGGGCCTG
CCAGGCACCG GCAACTTCGT CGGCGAGTTC CTGATCCTGA TCGGCAGCTT CGTGCATGTA
CCGTGGATCA CCGTGATTGC CACCACCGGC CTGGTGTTCG GTTCGGTGTA CTCGCTGATC
ATGATCCACC GCGCCTACTT CGGCCCGGCC AAGACCGACA CCGTGCTGGC CGGCATGGAC
GGTCGCGAAC TGATCATGGT TCTGGGTCTG GCGGTATTGC TGATCCTGCT GGGCGTGTAT
CCGCAGCCGT TCCTCGACAC CTCTGCCGCC ACCATGAGTG GTGTGCAGCA GTGGCTCGGA
TCCGCTTTCA CTCAACTCGC TTCGGCCCGG TAA
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| Protein sequence | MILPWLILIP FIGGFLCWLG ERFGATLPRW IALLTMSLLL GIGLWLWGTG DYTLAPAPGA
EPAWALEYKV QWIQRFGISI HLALDGLSLL MILLTGLLGV LSVLCSWKEI QRHVGFFHLN
LMWILGGVVG VFLALDLFLF FFFWEMMLVP MYFLIALWGH SSADGKKTRI YAATKFFIFT
QASGLIMLVA ILGLVLVNYN TTGVLTFNYS DLLKAELPAG IEYVLMLGFF IAFAVKLPVV
PFHSWLPDAH AQAPTAGSVD LAGILLKTAA YGLLRFALPL FPNASAEFAP IAMTLGLIGI
FYGAFLAFAQ TDIKRLIAFS SVSHMGFVLI GIYSGSQQAL QGAVIQMLAH GLSAAALFIL
SGQLYERLHT RDMRQMGGLW HRIAYLPAIS LFFAAASLGL PGTGNFVGEF LILIGSFVHV
PWITVIATTG LVFGSVYSLI MIHRAYFGPA KTDTVLAGMD GRELIMVLGL AVLLILLGVY
PQPFLDTSAA TMSGVQQWLG SAFTQLASAR
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