Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1724 |
Symbol | |
ID | 5191429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1975167 |
End bp | 1975925 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640586194 |
Product | DNA polymerase III subunit epsilon |
Protein accession | YP_001267064 |
Protein GI | 148546962 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family [TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAGCAGC AGCAAGATAA ACGGTTCGTC ATTCTCGATA CCGAAACCAC GGGTATGCCG GTTGGCGAAG GCCACCGGAT CATCGAGATC GGCTGTGTCG AGGTCATCGG CCGGCGCCTG ACCGGGCGGC ACTTCCACGT CTACCTGCAG CCCGACCGCG AGAGTGACGA GGGCGCGATC AACGTTCACG GCATCACGGA TGCCTTCCTG GTCGGCAAGC CCCGCTTTGG TGATGTCGCC GAGGAGTTCT TCCAGTTCAT CCAGGGCGCC ACGCTGGTCA TCCACAACGC GGCGTTCGAC GTTGGCTTCA TCAACAACGA ATTCGCCTTG CTGGGCCAGC AGGACCGTGC CGACATTTCG CAGCATTGCA CCATTCTGGA CACCCTGCTG CTGGCACGTT CGCGCCACCC GGGGCAGCGC AACAGCCTGG ATGCGCTGTG CAAACGCTAC GACATCGACA ACTCGGGCCG TGAGTTGCAC GGCGCACTGC TCGACTCGGA ACTGCTGGCC GACGTTTACC TGGCAATGAC CGGTGGCCAG ACCAGCCTGT CGTTGGCTGG GAATGGCGCA GATGCCGAAG AGGACGGGCA GGGCGCTGGC GGCAGCGAGA TCCGCCGGAT TGTCGGGCGT GCGCCAGGGC GGGTGATCAT GGCCAGCGCT GAAGAGCTGG AGGCGCATGC CGAGCGGCTG GCGGCCATTG CCAAGTCGGC GGGTGGGCCT TCGCTGTGGC AGGCCCTGAC TGAGACGCCA GGCGGCTGA
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Protein sequence | MEQQQDKRFV ILDTETTGMP VGEGHRIIEI GCVEVIGRRL TGRHFHVYLQ PDRESDEGAI NVHGITDAFL VGKPRFGDVA EEFFQFIQGA TLVIHNAAFD VGFINNEFAL LGQQDRADIS QHCTILDTLL LARSRHPGQR NSLDALCKRY DIDNSGRELH GALLDSELLA DVYLAMTGGQ TSLSLAGNGA DAEEDGQGAG GSEIRRIVGR APGRVIMASA EELEAHAERL AAIAKSAGGP SLWQALTETP GG
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