| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1723 |
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| Symbol | rnhA |
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| ID | 5191428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1974670 |
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| End bp | 1975116 |
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| Gene Length | 447 bp |
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| Protein Length | 148 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640586193 |
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| Product | ribonuclease H |
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| Protein accession | YP_001267063 |
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| Protein GI | 148546961 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0328] Ribonuclease HI |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.991139 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGATA GCGTCGAGAT GTTTACGGAT GGTGCCTGCA AGGGCAACCC TGGCCCGGGT
GGCTGGGGCG TGCTGATGAT CTACAAGGGC GTCGAGAAGG AACTGTGGGG CGGCGAACGT
GAGACCACCA ACAACCGCAT GGAGCTGATG GCCGCGATCC AGGGCCTGAT GTCGCTCAAG
CGTGAATGCG AGGTGGTACT GACCACCGAC TCGCAGTACG TGATGAAGGG CATCAACGAA
TGGATGGTCA ACTGGAAGAA GCGCGGCTGG AAGACCGCCG CCAAGGAGCC GGTGAAGAAC
GCTGACTTGT GGCAGCAGCT CGATGAGCAG GTCAACCGCC ACAAGGTGAC CTGGAAGTGG
GTACGCGGCC ATATCGGCCA CCCCGGCAAC GAACGCGCCG ACCAGCTGGC CAACCGTGGG
GTCGATGAGG TGCGCGCCCA GCGTTGA
|
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| Protein sequence | MSDSVEMFTD GACKGNPGPG GWGVLMIYKG VEKELWGGER ETTNNRMELM AAIQGLMSLK
RECEVVLTTD SQYVMKGINE WMVNWKKRGW KTAAKEPVKN ADLWQQLDEQ VNRHKVTWKW
VRGHIGHPGN ERADQLANRG VDEVRAQR
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