| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1717 |
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| Symbol | |
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| ID | 5192881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1966528 |
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| End bp | 1967601 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640586187 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001267057 |
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| Protein GI | 148546955 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4174] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.552339 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGCCT ACATCCTGCG CCGCCTGCTG CTGATCATTC CGACCCTGTT CGGCATCCTC
ATCATCAACT TCATCATCGT CCAGGCCGCC CCCGGTGGCC CGGTCGAGCA AATGATCGCC
AAACTCGAAG GCTTCGAAGG CGCCACCAGC CGCATTGCAG GTGGCGGCGC CGAGGTTTCC
GTGGCCGGCT CCAACTACCG CGGCGCCCAG GGCCTGGACC CGGCCCTGAT CGCTGAAATC
GAGCGCATGT ACGGCTTCGA CAAGTCGCCG CCCGAGCGCC TGTGGATCAT GGTCAAGAAC
TACGCCCGGC TGGACTTCGG CGACAGTTTC TTCCGCGACG CCAAGGTGAT CGACCTGATC
GCCGAGAAGA TGCCGGTTTC GATCTCGCTG GGGCTGTGGA GCACGCTGAT CATGTACCTG
GTGTCGATCC CGCTGGGGAT CGCCAAGGCC GTGCGCCACG GCAGCCACTT CGACGTGTGG
ACCAGTTCGG CGATCATCGT CGGCTACGCC ATCCCGGCGT TCCTGTTCGC CATCCTGCTG
ATCGTGCTGT TCGCCGGTGG CAGCTACTTC GACTGGTTCC CCCTGCGTGG CCTCACCTCC
AACAACTTCG ACGAACTGAG CACCACCGGC AAGGTGCTGG ACTACTTCTG GCACCTGGTG
CTGCCAATCA CCGCGCTGGT CATCGGCAAC TTCGCCACCA TGACCCTGCT GACCAAGAAC
AGCTTCCTCG ACGAGATCAA CAAACAATAC GTGGTCACCG CCAAAGCCAA GGGCCTGAGC
CGATCACGGG TGCTGTACGG TCATGTGTTC CGCAACGCCA TGCTGCTGGT GATCGCCGGT
TTCCCTTCGG CGTTCATCGG CATCTTCTTC ACAGGCTCCT TGCTGATCGA GGTGATCTTC
AGCCTCGACG GCCTGGGCCT GATGAGTTTC GAAGCGGCCA TCAACCGCGA CTACCCGGTG
GTCTTCGGCA CCCTGTTCAT CTTCACCCTG CTAGGGCTGG TGGTGAAACT GATCGGCGAC
CTGACCTACA CCTTGGTCGA TCCGCGCATC GACTTTGCCA GCCGGGAGCA CTGA
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| Protein sequence | MLAYILRRLL LIIPTLFGIL IINFIIVQAA PGGPVEQMIA KLEGFEGATS RIAGGGAEVS
VAGSNYRGAQ GLDPALIAEI ERMYGFDKSP PERLWIMVKN YARLDFGDSF FRDAKVIDLI
AEKMPVSISL GLWSTLIMYL VSIPLGIAKA VRHGSHFDVW TSSAIIVGYA IPAFLFAILL
IVLFAGGSYF DWFPLRGLTS NNFDELSTTG KVLDYFWHLV LPITALVIGN FATMTLLTKN
SFLDEINKQY VVTAKAKGLS RSRVLYGHVF RNAMLLVIAG FPSAFIGIFF TGSLLIEVIF
SLDGLGLMSF EAAINRDYPV VFGTLFIFTL LGLVVKLIGD LTYTLVDPRI DFASREH
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