| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1713 |
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| Symbol | |
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| ID | 5192106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1958417 |
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| End bp | 1961347 |
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| Gene Length | 2931 bp |
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| Protein Length | 976 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640586183 |
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| Product | hypothetical protein |
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| Protein accession | YP_001267053 |
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| Protein GI | 148546951 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases
[COG2334] Putative homoserine kinase type II (protein kinase fold) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGTC AACAACAAAA AAACGTCTCC CCTGCCCTCG AGCAGCTCAT CCAGCGCGCC
GGCCTGCCAG GCCCCACGCT CAGCGAAGCC CAGGCGCATG CCTTGCTGCA GATGCACTAC
GGCGTTGCCG GTGGGTTGTC GGCATTGGGC AGTCAGCAGG ACCTGAACTT CCGGGTCGAC
ACGGCTGGAG GGCAGTTCGT GCTCAAGGCC TGTCATGACA GCTACGCCAA GGTGGAGCTG
GAGGCGCAGC ATGCCGCCCT CGCCTACCTG CGTGAGCACG GCCTGTCGGT GCCCGCAGTA
CGTGCGGCGC ACAGCGGCGA AAACTTGCTG GCCGTGGAGG TTGATGGCCA ACCGCTGCGG
GTACGCCTGC TCGACTACAT TGACGGTCAA CCGTTGACGC GTCTCAAGCA CATGCCAGCG
CAGGTGATGG CCGAAATGGG CAGGCTGTGC GCGCGGCTCG ACAGCGCCCT GGCCGATTTC
GACCACCCCG GCCTTGCGCG CACCCTGCAG TGGGACCCGC AACACGCCCA GGCGTTGATC
CAGCATCTGC TGCCCGTCCT GCACAACACC GAGCAACGCG TCCGCATCGA ACACGCCACC
CGCGTCGCCG ACGAACACCT CGCACCGCTG GTTGATCGGC TGCCAAGCCA GGCCGTGCAC
CTGGACATTA CCGACGACAA CACCGTCTGG GCCCGTGATG GCGAGCGCCA GTGGCAGTTG
CAAGGAGTGA TCGACTTCGG CGACCTGCTG CGCACGTGGC GCATCGCCGA CCTGTCGGTG
ACCTGCGCGG CGCTGCTGCA TCACGCCGAA GGCGACCCGC TGCGGATCCT GCCGGCGATC
AGCGCCTACC AGGCGCTCAA CCCGCTGACC GACGCCGAGC TGCGTGCGTT GTGGCCTCTG
GTACTGAACC GCGCGGCAGT GCTGGTGCTG AGCAGTGCGC AGCAACTGGC CGTGGACCCG
GGCAACCAGT ACACCCGCGA CAACGTCGCC CATGAGTGGG AAATCTTCGA CACCGCCACC
GCCGTGCCTT TCGCGCTAAT GCAAGCGGCC ATCCTGCAAG CTGCCGGCCT GCAGCCCGCC
ACGCCAGACC TGACCGGCTG CGCGCCGCTG CTGCCCGAAC TTGCGGGGCA ACCGGTGACG
CGCGTGGACC TCGGCGTGCT CAGCGAGCAT TGTGAAGCGG GCAACTGGGA GCAACCCGGC
TTCGACCAAC GTCTATTAAC CCTGCACCCT GCCCCGGCCT GCAGCCTGCA CGGGCAGTAT
CGCCTGTCGC AAACCCATAT CGACCGCCCC GACGAACCCG CCACCTGCGC CCTTGGCGTC
GAGCTGCATG TGTCCAACGG CAGCCCGGTG CAAGCGCCGG CAGCCGGCAC CTGGCAGCAC
CGCGGCGACG GCCGGGGCTG CCTGCGCACC CCGCATTGGG CTTTGTGGCT GCAAGGCCTG
GAAGACGCAC CGGCAGACGG CCAGGCCGTG GAAAAGGGCC AGTTCCTGGG CAGCAGCTGC
GGCTTCCTCA GCGTGCAGTT GTGCCTGGAC AATGGCATCC ATCCGCCGCG CTTCGCCACG
CCTTCACAAG CCGCCGCCTG GCTGGCCCTG TGCCCGTCAC CGGCCGCCCT GCTGGGCTTC
GATTGCGATG CCGAGCCGCT ACCCGATCCG CAAGCGCTGC TGGCCCGCCG CGATGCCAGC
TTCGCCCGCT CGCAGAAGCA CTACTACGCG CAACCGCCGC ACATTGAACG TGGCTGGCGC
AACTACCTGA TCGACATGCA GGGCCGTTCC TATCTGGACA TGCTCAACAA CGTCGCGGTG
CTGGGCCATG GCCATCCACG CATGGTTGCC GAGTCGGCGC GGCAATGGTC GCTGCTGAAC
ACCAACTCGC GCTTCCATTA CGCAGCAATC ACCGAATTCT CCGAGCGCCT GCTGGACCTG
GCCCCCGAAG GTTTCGACCG GGTGTTCATG GTCAACAGCG GCACCGAGGC CAACGACCTG
GCGATTCGTC TGGCCTGGGC CTACAGTGGC GGGCGCGATC TGCTCAGTGT GCTGGAGGCC
TACCACGGCT GGTCGGTGGC CACCGATGCC ATCTCCACGT CGATCGCCGA CAACCCGCAA
GCCCTGGAAA CCCGCCCAGA CTGGGTACAC CCGGTCGAAG CACCGAACAC CTTCCGCGGC
CGCTTCCGCG GGGCCGACAG CGCCGCCGAC TACCTGCAAG ACGTCGACGC CAAGCTGGCT
GACCTCGACG CCCGTGGCCG TCAGCTGGCG GGCATCATCT GCGAACCGGT GTACGGCAAT
GCCGGCGGTA TCTCGCTGCC CGCAGGCTAC CTGCGCGCAG CCTATGCCAA AGTCCGCGCC
CGCGGCGGGG TGTGCATCGC CGACGAAGTG CAGGTGGGCT ATGGCCGCCT GGGCGAGTAC
TTCTGGGGCT TCGAGGAACA GGGCGTGGTG CCGGACATCA TTACCATGGC CAAGGGCATG
GGTAACGGCC AGCCACTGGG CGTGGTCATC ACCCGTCGCG AAATCGCCGA GGCGCTGGAG
GCCGAGGGCT ACTTCTTCTC CTCGGCCGGT GGCAGCCCGG TCAGTTGCCG CATCGGCATG
GCGGTGCTGG ATGTCATGCA GGAGGAAGGC CTGTGGGACA ACGCCCGTGA CACCGGGCGC
TACTTCAAGG CACGCCTGCA GGCGCTGGTC GACAAGCACC CGCTGGCCGG AGCGGCACAT
GGTTCGGGCT TCTACCTGGG GCTGGAACTG GTGCGCGACC GCACCACCCT GGAGCCGGCC
ACCGAAGAAA CCATGATGCT GTGCGATCGC CTGCGTGACC TGGGCATCTT CATGCAGCCG
ACCGGCGACT ACCTGAACAT CCTCAAGATC AAGCCACCGA TGTGCACCAG CCGGGCGAGC
GTGGACTACT TTGTCGATTG TATTGATCAG GTACTGGGTG AAGGGCTGTA G
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| Protein sequence | MPSQQQKNVS PALEQLIQRA GLPGPTLSEA QAHALLQMHY GVAGGLSALG SQQDLNFRVD
TAGGQFVLKA CHDSYAKVEL EAQHAALAYL REHGLSVPAV RAAHSGENLL AVEVDGQPLR
VRLLDYIDGQ PLTRLKHMPA QVMAEMGRLC ARLDSALADF DHPGLARTLQ WDPQHAQALI
QHLLPVLHNT EQRVRIEHAT RVADEHLAPL VDRLPSQAVH LDITDDNTVW ARDGERQWQL
QGVIDFGDLL RTWRIADLSV TCAALLHHAE GDPLRILPAI SAYQALNPLT DAELRALWPL
VLNRAAVLVL SSAQQLAVDP GNQYTRDNVA HEWEIFDTAT AVPFALMQAA ILQAAGLQPA
TPDLTGCAPL LPELAGQPVT RVDLGVLSEH CEAGNWEQPG FDQRLLTLHP APACSLHGQY
RLSQTHIDRP DEPATCALGV ELHVSNGSPV QAPAAGTWQH RGDGRGCLRT PHWALWLQGL
EDAPADGQAV EKGQFLGSSC GFLSVQLCLD NGIHPPRFAT PSQAAAWLAL CPSPAALLGF
DCDAEPLPDP QALLARRDAS FARSQKHYYA QPPHIERGWR NYLIDMQGRS YLDMLNNVAV
LGHGHPRMVA ESARQWSLLN TNSRFHYAAI TEFSERLLDL APEGFDRVFM VNSGTEANDL
AIRLAWAYSG GRDLLSVLEA YHGWSVATDA ISTSIADNPQ ALETRPDWVH PVEAPNTFRG
RFRGADSAAD YLQDVDAKLA DLDARGRQLA GIICEPVYGN AGGISLPAGY LRAAYAKVRA
RGGVCIADEV QVGYGRLGEY FWGFEEQGVV PDIITMAKGM GNGQPLGVVI TRREIAEALE
AEGYFFSSAG GSPVSCRIGM AVLDVMQEEG LWDNARDTGR YFKARLQALV DKHPLAGAAH
GSGFYLGLEL VRDRTTLEPA TEETMMLCDR LRDLGIFMQP TGDYLNILKI KPPMCTSRAS
VDYFVDCIDQ VLGEGL
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