Gene Pput_1709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1709 
Symbol 
ID5193288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1953340 
End bp1953897 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content67% 
IMG OID640586179 
Productpotassium-transporting ATPase subunit C 
Protein accessionYP_001267049 
Protein GI148546947 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2156] K+-transporting ATPase, c chain 
TIGRFAM ID[TIGR00681] K+-transporting ATPase, C subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.272988 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCTT ATCTACGCCC GGCATTGAGC CTGGCTTTGT TGATGACCCT GGTGACGGGC 
GCCCTGTATC CGCTGGCGGT GACCGGTATT GCCCAAGTCG CTTTCCCGAA CCAGGCCAAC
GGTAGCCTGG TACGCGATGC GCAAGGCCAG GTGCGGGGTT CGGCATTGAT CGCCCAGGAC
TTCCAGGGCG ATGGCTGGTT CCACTCGCGG CCCTCGGCAG GTGCCTACGC GACCGTGGCC
AGCGGCGCCA GCAACCTGTC GCCGAGCAAC CCGGCGCTGG CTGAGCGGGT AAAGGGCGAT
GCGGCCACGT TGTATCAGGC GCAGCAGGGG CCAGTGCCGC AGGCGCTGCT GACCACCTCG
GGCAGCGGCC TGGACCCGCA CTTGCCACCG GAGGCCTTGG CCTATCAGAT CCCGCGGGTG
GCGGCGGCAC GGCAGCTGCC GGTCGAGCGC TTGCAAGCCT TGCTGGAACA GGCCACCCTC
CACCCATTGA TCGGCCCGCC GGTGGTCAAC GTGCTGGCGT TGAACCAGGC CTTGGAAAAG
CTCGCCATTG TCAGGTAA
 
Protein sequence
MTAYLRPALS LALLMTLVTG ALYPLAVTGI AQVAFPNQAN GSLVRDAQGQ VRGSALIAQD 
FQGDGWFHSR PSAGAYATVA SGASNLSPSN PALAERVKGD AATLYQAQQG PVPQALLTTS
GSGLDPHLPP EALAYQIPRV AAARQLPVER LQALLEQATL HPLIGPPVVN VLALNQALEK
LAIVR