| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1707 |
|---|
| Symbol | |
|---|
| ID | 5192748 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 1949571 |
|---|
| End bp | 1951265 |
|---|
| Gene Length | 1695 bp |
|---|
| Protein Length | 564 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640586177 |
|---|
| Product | potassium-transporting ATPase subunit A |
|---|
| Protein accession | YP_001267047 |
|---|
| Protein GI | 148546945 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2060] K+-transporting ATPase, A chain |
|---|
| TIGRFAM ID | [TIGR00680] K+-transporting ATPase, KdpA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.260767 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACAGTT ACGATTTCGC CTTGCTCCTG GCATTCTTTG CCATTGTGCT GCTACCAGCA
CCCTGGCTCG GGCGGTTCTA CTTCAAGGTC ATGGAAGGCC AGCGTACCTG GCTGACGCCT
GTGCTGGGGC CGGTCGAGCA GGGCTGTTAC CGGCTGGCGG GTGTGAACGC CAGCCAGGAG
CAGAACTGGC GGCAATACAC CCTGGCCCTG CTGGCGTTCA ACCTGGTCGG CTTCCTGCTG
CTGTTCAGCG TGCTGCTGTT GCAGGGCCAC CTGCCACTCA ACCCACAGCA CCTGCCTGGC
CAGGAATGGT CGCTGGCGTT CAACACCGCC GTCAGTTTCG TTACCAACAC CAACTGGCAG
GCCTACAGCG GTGAGGCGTC GGTCAGCTAC CTGAGCCAGA TGCTTGGCCT GACCGTGCAG
AACTTTGTCA GCCCTGCCAC CGGCCTGGCC GTGCTGGTTG CCCTGTGCCG CGGTATCGCC
CGACGCAGCG CGACGACGCT GGGCAACTTC TGGGTCGACA TGACCCGTGC CACCCTCTAC
GGCCTGTTGC CGCTGTGCTT GCTGCTGGCG CTGTTGCTGG TGTGGCAGGG CGTACCGCAG
ACCTTTGCCG ACTACGCCCA CGCGCTGACC TTGCAAGGTG CCGACCAGAC CATTCCGCTG
GGGCCGGCCG CCAGCCAGAT CGCCATCAAG CAATTGGGTA CCAATGGCGG TGGCTTCTTC
GGCGTCAACT CGGCGCACCC GTTCGAAAAC CCAACGGCCT GGAGCAACCT GTTCGAGGTG
GCATCGATCA TCCTCATTCC GGTGGCGTTG GTGTTCACCT TCGGTCACTA CGTGAAGGAC
CTGCGTCAGA GCCGCGCCAT CCTCGCCTGC ATGCTTGCCC TGTTCCTGAT CGGCGGTAGC
ACGGCGCTGT GGTCCGAGCA CCAGCCAAAC CCGGCCCTGG ACAGCACGCA GGTGCAGCAG
ACCGCCCCCC TGGAGGGCAA GGAAAGCCGC TTCGGCACCA CCGGTTCGGT GCTGTGGGCG
GTCACCACCA CCGCCGCCTC CAACGGTTCG GTCAACGCCA TGCACGACAG CCTGAACCCG
CTGACCGGTA TGGTGGCGAT GGTCAACATG ATGGTCGGCG AGGTGATATT CGGCGGCGTC
GGCGCGGGCC TCTACGGCAT GCTGCTGTTC GTCCTTATCG CGGTGTTCCT GGCCGGGCTG
ATGATTGGCC GTACCCCGGA ATACCTGGGC AAGAAGCTGC AGGCCCGTGA AGTGCAGCTT
CTGGTGGCAA CCCTGCTGGT GATGCCGGTC GGCGTGCTGG TACTTGGCGC CATCGCCGCC
AGCCTGCCCG GCCCGGCCGG GGCGGTCACC AACCCGGGGG CGCATGGTTT CAGCCAGTTG
CTGTACGCCT ATACCTCGGG CTCGGCCAAC AACGGCTCGG CCTTTGCCGG GTTTGGCGCC
AACACCGTGT ACCACAACCT GATGATCGGC CTGGCCATGC TCATCGGCCG CTTCGGCTAC
ATCCTGCCGA TACTGGCGTT GGCCGGCAGC CTGGCGGCGA AAAAAAGCGC GCCGCTGGGG
CAGAACAGCT TCCCGACTCA CGGCCCGCTG TTCACCGGCT TGCTGCTGGT GACCATCCTG
CTGGTCGGTG GCCTGACCTT CCTGCCGACC CTGGCCCTTG GGCCAATCGC CGAACACCTT
AGCCTGGGTT TTTGA
|
|---|
| Protein sequence | MHSYDFALLL AFFAIVLLPA PWLGRFYFKV MEGQRTWLTP VLGPVEQGCY RLAGVNASQE
QNWRQYTLAL LAFNLVGFLL LFSVLLLQGH LPLNPQHLPG QEWSLAFNTA VSFVTNTNWQ
AYSGEASVSY LSQMLGLTVQ NFVSPATGLA VLVALCRGIA RRSATTLGNF WVDMTRATLY
GLLPLCLLLA LLLVWQGVPQ TFADYAHALT LQGADQTIPL GPAASQIAIK QLGTNGGGFF
GVNSAHPFEN PTAWSNLFEV ASIILIPVAL VFTFGHYVKD LRQSRAILAC MLALFLIGGS
TALWSEHQPN PALDSTQVQQ TAPLEGKESR FGTTGSVLWA VTTTAASNGS VNAMHDSLNP
LTGMVAMVNM MVGEVIFGGV GAGLYGMLLF VLIAVFLAGL MIGRTPEYLG KKLQAREVQL
LVATLLVMPV GVLVLGAIAA SLPGPAGAVT NPGAHGFSQL LYAYTSGSAN NGSAFAGFGA
NTVYHNLMIG LAMLIGRFGY ILPILALAGS LAAKKSAPLG QNSFPTHGPL FTGLLLVTIL
LVGGLTFLPT LALGPIAEHL SLGF
|
|---|
| |