| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1705 |
|---|
| Symbol | |
|---|
| ID | 5192474 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 1948184 |
|---|
| End bp | 1949233 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640586175 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001267045 |
|---|
| Protein GI | 148546943 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.873743 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAACA ATGATCGCCT GCTGGTCCAG ATTCTGCTGG TGGCGTTGCT AGGTGCCGGC
CTGTGGGTGA TGGCACCGTT CATATCGGCA TTGCTGTGGG GGGCCATCCT GGCTTTTGCC
AGCTGGCCGT TGATGCGCTT CCTTACGCGC CTGCTGGGCG GTCGTGAGAC GCTGGCAGCC
GGCCTGCTGA CCATGGCCTG GATCCTGATC GTGGCACTGC CGCTGGTGTG GCTGGGGTTC
AACCTGGCCG ATCACATCCG CGACGCTACG GCGTTCGTGC GTGACGTGCA GGTCGACGGC
CTGCCCGATG CACCGGCCTG GCTGGGTGGC ATTCCATTCG TTGGCGAGCG TCTGGTCAAC
GGTTGGCAAT CGCTGGACCA GCAAGGCGCA GCCTTGCTTA CCTCGATCAA GCCTTACTTT
GGGCAGGTGG GCAACTGGTT GCTGGCGCGC AGCGCGCAGA TCGGCAGCGG CGTGCTGGAA
CTGACCCTGA GCCTGGTGTT CGTGTTCTTC TTCTACCGCG ACGGGCCACG CTTGGCGGCA
TTCGTGCTGC GCTTGCTGCA CCGGCTGGTG GGCGAACGCG CCGAGTATTA CCTGGACCTG
GTAGCCGCTA CCGTGCAGCG GGTGGTCAAC GGGGTGATCG GCACGGCGGC CGCGCAGGCC
CTGCTGGCAT TGATCGGCTT CCTGATCGCC GGGGTGCCCG GGGCGATCGT GCTGGGGTTG
GTGACCTTCA TGCTCAGCCT GATCCCCATG GGGCCGCCAC TGGCCTGGAT CCCGGCCACC
GCTTGGCTGG TGTGGAAGGG CGAATACGGC ATGGCGGTGT TCCTGGGCGT CTGGGGCACC
TTCGTCATCA GTGGCGTGGA CAACGTGCTC AAACCGTACC TGATCAGCCG TGGGGGCAAC
CTGCCGCTGG TGATCGTGCT GCTGGGCGTG TTCGGCGGCT TGCTTGCCTT CGGCTTCATT
GGCCTGTTCA TCGGGCCGAC CTTGCTGGCG GTGGGCTACA GCCTCCTGCT GGACTGGAGC
CGAAACGCGG CGCAGCCGCC ACAACAGTAA
|
|---|
| Protein sequence | MVNNDRLLVQ ILLVALLGAG LWVMAPFISA LLWGAILAFA SWPLMRFLTR LLGGRETLAA
GLLTMAWILI VALPLVWLGF NLADHIRDAT AFVRDVQVDG LPDAPAWLGG IPFVGERLVN
GWQSLDQQGA ALLTSIKPYF GQVGNWLLAR SAQIGSGVLE LTLSLVFVFF FYRDGPRLAA
FVLRLLHRLV GERAEYYLDL VAATVQRVVN GVIGTAAAQA LLALIGFLIA GVPGAIVLGL
VTFMLSLIPM GPPLAWIPAT AWLVWKGEYG MAVFLGVWGT FVISGVDNVL KPYLISRGGN
LPLVIVLLGV FGGLLAFGFI GLFIGPTLLA VGYSLLLDWS RNAAQPPQQ
|
|---|
| |