Gene Pput_1702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1702 
Symbol 
ID5194242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1945553 
End bp1946416 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content63% 
IMG OID640586172 
Producthypothetical protein 
Protein accessionYP_001267042 
Protein GI148546940 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0351534 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTTA TGGACATTGC CGAACCGCCC CGCGATGCCG ACAATGGGCC ATCATTCCGG 
TCCGGACCAG GCGCCATGTC GCAGCAGATC TTCTTCGCCC ATGCCAACGG TTTCCCATCG
GCCACCTACG GCAAGCTGTT TGCAGCGCTG GCGCCGGACT ATCAGGTGCA GCACCTGGCC
CAGCACGGGC ATGACCCGCG CTTTCCCGTG GACGAAAACT GGCAAAGCCT GGTCGATGAA
TTGTTGCATC ACCTGGCGCA GCAGGACCAG CCGGTCTGGG GCGTCGGCCA TTCGCTGGGT
GGCGTGTTGC ACCTGCACGC GGCATTGCGC TGCCCCGAGT ACTACCGGGG GCTGGTGATG
CTCGACTCCC CGGTGCTCAC CCGCGCTGAT CAATGGCTGC TGCGTACAGC CAAGCGCTTT
GGTTTCATTG ACCGCATCAC ACCGGCCGGG CGTACCCTGG GGCGTCGCGA AACGTTCAAT
GACCGCGACA GCGCCCGGGA CTATTTCGCT GGCAAATCAC TGTTCCGCCA TTTCGATCCC
GATTGCCTCG ACGCTTATGT AGAACATGGC CTGCAGGTGG TGGAACAAGG GCTGCAGTTG
CGCTTCGACC CTGCTACTGA AATCAGCATC TACCGCAGCA TCCCGCATAC CAGCCCCGCC
CCCGCGCGCC AGTTGCAGGT GCCGCTGGCC ATGGTGCGCG GCAACCGGAG CAACGTCATT
CGTCGCCACC ACACCTTGGC TGTGCGCAGT ATGCCCAAAG GTGAATACCA CAGTGTACCG
GGTGGGCACA TGTTCCCGCT GGAGCGCCCG GCCGACACTG CCAGCCTGAT CAAGGGCCTG
TTCGACCGCT GGAGCCAGGC ATGA
 
Protein sequence
MTFMDIAEPP RDADNGPSFR SGPGAMSQQI FFAHANGFPS ATYGKLFAAL APDYQVQHLA 
QHGHDPRFPV DENWQSLVDE LLHHLAQQDQ PVWGVGHSLG GVLHLHAALR CPEYYRGLVM
LDSPVLTRAD QWLLRTAKRF GFIDRITPAG RTLGRRETFN DRDSARDYFA GKSLFRHFDP
DCLDAYVEHG LQVVEQGLQL RFDPATEISI YRSIPHTSPA PARQLQVPLA MVRGNRSNVI
RRHHTLAVRS MPKGEYHSVP GGHMFPLERP ADTASLIKGL FDRWSQA